ASU_07782 (Ascaris suum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 ASU_07782 T308163_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tll
M02408_2.00 		Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN		 PBM
Weirauch et al.(2014)
pTH5714 		0.983 0.814
tll
M03932_2.00 		Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN		 SELEX
Nitta et al.(2015)
tll_1 		0.983 0.814
tll
M03933_2.00 		Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN		 SELEX
Nitta et al.(2015)
tll_2 		0.983 0.814
tll
M06558_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Mathelier et al.(2014)
MA0459.1 		0.983 0.814
tll
M06424_2.00 		Drosophila melanogaster
AAAGTYA
TRACTTT		 B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720 		0.983 0.814
tll
M06425_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720 		0.983 0.814
tll
M09688_2.00 		Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK		 Misc
Kulakovskiy et al.(2009)
tll 		0.983 0.814
tll
M11190_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TLL_Q6 		0.983 0.814
dsf
M06431_2.00 		Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT		 B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381 		0.895 0.729
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.892 0.743
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.892 0.743
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.892 0.743
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.892 0.743
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.892 0.743
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.892 0.743
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.892 0.743
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.892 0.743
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.892 0.743
Hnf4
M03935_2.00 		Drosophila melanogaster
RGGKCAAAGGTCA
TGACCTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_1 		0.761 0.557
Hnf4
M03936_2.00 		Drosophila melanogaster
RGGKCAAAGTYCA
TGRACTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_2 		0.761 0.557
Hnf4
M03937_2.00 		Drosophila melanogaster
RGTVCAAAGKTCR
YGAMCTTTGBACY		 SELEX
Nitta et al.(2015)
Hnf4_3 		0.761 0.557
Hnf4
M03938_2.00 		Drosophila melanogaster
RTGRACTTTGGACY
RGTCCAAAGTYCAY		 SELEX
Nitta et al.(2015)
Hnf4_4 		0.761 0.557
Hnf4
M06428_2.00 		Drosophila melanogaster
DKNKWSSNGGGGTCA
TGACCCCNSSWMNMH		 B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914 		0.761 0.557
Hnf4
M06429_2.00 		Drosophila melanogaster
GGGGTCAH
DTGACCCC		 B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914 		0.761 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_07782 Nuclear receptor 86 160

Links

Other Nuclear receptor family TFs
Other Ascaris suum TFs

349 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
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Ca_16645 Cicer arietinum Ca_16645 N
Ca_06925 Cicer arietinum Ca_06925 N
GLYMA05G17994 Glycine max GLYMA05G17994 N
mgf004018m Mimulus guttatus mgf004018m N
OLONG_015294 Oryza longistaminata OLONG_015294 N
OS08G0433400 Oryza sativa OS08G0433400 N
PDK_20s1698071g001 Phoenix dactylifera PDK_20s1698071g001 N
e_gw1.389.24.1 Physcomitrella patens e_gw1.389.24.1 N
e_gw1.2.476.1 Physcomitrella patens e_gw1.2.476.1 N
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SELMODRAFT_78303 Selaginella moellendorffii SELMODRAFT_78303 N
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N
SELMODRAFT_90153 Selaginella moellendorffii SELMODRAFT_90153 N
SELMODRAFT_89380 Selaginella moellendorffii SELMODRAFT_89380 N
SELMODRAFT_84608 Selaginella moellendorffii SELMODRAFT_84608 N
SELMODRAFT_78848 Selaginella moellendorffii SELMODRAFT_78848 N
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N
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TRIUR3_30803 Triticum urartu TRIUR3_30803 N
GRMZM2G111045 Zea mays GRMZM2G111045 I