CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

D917_03517 *(Trichinella nativa)* Nuclear receptor
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00105 (zf-C4)	IPR001628	D917_03517	T308416_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ftz-f1 M02407_2.00	Drosophila melanogaster	RRGGTCAH	DTGACCYY	PBM Weirauch et al.(2014) pTH5709	0.988	0.829
ftz-f1 M06417_2.00	Drosophila melanogaster	MMRKYYSAAGGWCRCYGM	KCRGYGWCCTTSRRMYKK	B1H Zhu et al.(2011) ftz-f1_FlyReg_FBgn0001078	0.988	0.829
ftz-f1 M06418_2.00	Drosophila melanogaster	AAGGTCA	TGACCTT	B1H Zhu et al.(2011) ftz-f1_SANGER_5_FBgn0001078	0.988	0.829
NR5A2 M05589_2.00	Homo sapiens	YCAAGGYCRYGRCCTTSR	YSAAGGYCRYGRCCTTGR	SELEX Yin et al.(2017) NR5A2_eDBD_HT-SELEX_1	0.984	0.814
NR5A2 M05590_2.00	Homo sapiens	NYCAAGGTCAH	DTGACCTTGRN	SELEX Yin et al.(2017) NR5A2_eDBD_HT-SELEX_2	0.984	0.814
NR5A2 M05591_2.00	Homo sapiens	YGRCCTTSVNYSAAGGYCR	YGRCCTTSRNBSAAGGYCR	SELEX Yin et al.(2017) NR5A2_eDBD_HT-SELEX_3	0.984	0.814
NR5A2 M09271_2.00	Homo sapiens	NBYCAAGGYCA	TGRCCTTGRVN	Misc Kulakovskiy et al.(2013) NR5A2_HUMAN.H11MO.0.B	0.984	0.814
NR5A2 M11126_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LRH1_Q5_01	0.984	0.814
NR5A2 M11127_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LRH1_Q5	0.984	0.814
NR5A2 M11128_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LRH1_Q6	0.984	0.814
NR5A2 M05592_2.00	Homo sapiens	YCAAGGYCRYGACCTTSR	YSAAGGTCRYGRCCTTGR	SELEX Yin et al.(2017) NR5A2_eDBD_Methyl-HT-SELEX_1	0.984	0.814
NR5A2 M05593_2.00	Homo sapiens	NYCAAGGTCRH	DYGACCTTGRN	SELEX Yin et al.(2017) NR5A2_eDBD_Methyl-HT-SELEX_2	0.984	0.814
NR5A2 M05594_2.00	Homo sapiens	YGRCCTTSVNBSAAGGYCR	YGRCCTTSVNBSAAGGYCR	SELEX Yin et al.(2017) NR5A2_eDBD_Methyl-HT-SELEX_3	0.984	0.814
Nr5a2 M00816_2.00	Mus musculus	VAAGGTCR	YGACCTTB	PBM Weirauch et al.(2013) pTH3468	0.981	0.786
Nr5a2 M08158_2.00	Mus musculus	VRDBTCAAGGYCANN	NNTGRCCTTGAVHYB	ChIP-seq Mathelier et al.(2014) MA0505.1	0.981	0.786
Nr5a2 M09320_2.00	Mus musculus	NBYCAAGGYCA	TGRCCTTGRVN	Misc Kulakovskiy et al.(2013) NR5A2_MOUSE.H11MO.0.A	0.981	0.786
Nr5a2 M09616_2.00	Mus musculus	BYCAAGGYCA	TGRCCTTGRV	Misc Heinz et al.(2010) Pancreas-LRH1_GSE34295	0.981	0.786
Nr5a2 M09615_2.00	Mus musculus	BYCAAGGYCA	TGRCCTTGRV	Misc Heinz et al.(2010) mES-Nr5a2_GSE19019	0.981	0.786
NR5A1 M05613_2.00	Homo sapiens	NNCAAGGYCRN	NYGRCCTTGNN	SELEX Yin et al.(2017) NR5A1_FL_HT-SELEX	0.978	0.786
Nr5a1 M09322_2.00	Mus musculus	NBYCAAGGYCA	TGRCCTTGRVN	Misc Kulakovskiy et al.(2013) STF1_MOUSE.H11MO.0.B	0.978	0.786
NR5A1 M11142_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SF1_Q5_01	0.978	0.786
NR5A1 M11143_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SF1_Q5	0.978	0.786
NR5A1 M11144_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SF1_Q6_01	0.978	0.786
NR5A1 M11145_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SF1_Q6	0.978	0.786
NR5A1 M05614_2.00	Homo sapiens	NNSAAGGHCRN	NYGDCCTTSNN	SELEX Yin et al.(2017) NR5A1_FL_Methyl-HT-SELEX	0.978	0.786
nhr-25 M08226_2.00	Caenorhabditis elegans	MAAGGTCA	TGACCTTK	ChIP-seq Contrino et al.(2012) Mw160	0.977	0.814
Hr39 M03942_2.00	Drosophila melanogaster	CAAGGHCRN	NYGDCCTTG	SELEX Nitta et al.(2015) Hr39_1	0.950	0.600
Hr39 M03943_2.00	Drosophila melanogaster	CAAGGYCRH	DYGRCCTTG	SELEX Nitta et al.(2015) Hr39_2	0.950	0.600
Rorc M09324_2.00	Mus musculus	NDAWSTRRGTCA	TGACYYASWTHN	Misc Kulakovskiy et al.(2013) RORG_MOUSE.H11MO.0.B	0.867	0.586
Rorc M09617_2.00	Mus musculus	AWBTRGGTCA	TGACCYAVWT	Misc Heinz et al.(2010) EL4-RORgt.Flag_GSE56019	0.867	0.586
Rora M00819_2.00	Mus musculus	NNRGGTCA	TGACCYNN	PBM Weirauch et al.(2013) pTH3464	0.866	0.571
RORA M03353_2.00	Homo sapiens	NMRAGGTCAAVYYVAGGTCA	TGACCTBRRBTTGACCTYKN	SELEX Jolma et al.(2013) RORA_1	0.866	0.571
RORA M03354_2.00	Homo sapiens	WAWSTRGGTYASTAGGTCA	TGACCTASTRACCYASWTW	SELEX Jolma et al.(2013) RORA_2	0.866	0.571
RORA M02705_2.00	Homo sapiens	WWVDAGGTCA	TGACCTHBWW	SELEX Mathelier et al.(2014) MA0071.1	0.866	0.571
RORA M02706_2.00	Homo sapiens	NDWAWBTAGGTCAN	NTGACCTAVWTWHN	SELEX Mathelier et al.(2014) MA0072.1	0.866	0.571
RORA M09265_2.00	Homo sapiens	VWNDRGGBCARDR	YHYTGVCCYHNWB	Misc Kulakovskiy et al.(2013) RORA_HUMAN.H11MO.0.C	0.866	0.571
Rora M09327_2.00	Mus musculus	VWNDRGGBCARDR	YHYTGVCCYHNWB	Misc Kulakovskiy et al.(2013) RORA_MOUSE.H11MO.0.C	0.866	0.571
RORA M11090_2.00	Homo sapiens	DWWWVDAGGTCAH	DTGACCTHBWWWH	Transfac Matys et al.(2006) V$RORA1_01	0.866	0.571
RORA M11091_2.00	Homo sapiens	DWAWBTAGGTCAN	NTGACCTAVWTWH	Transfac Matys et al.(2006) V$RORA2_01	0.866	0.571
RORA M11092_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORALPHA_Q4	0.866	0.571
RORA M11093_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORA_Q4	0.866	0.571
Rorb M00820_2.00	Mus musculus	NRGGTCANN	NNTGACCYN	PBM Weirauch et al.(2013) pTH3469	0.861	0.571
rorb M02404_2.00	Tetraodon nigroviridis	NGAGGTCANN	NNTGACCTCN	PBM Weirauch et al.(2014) pTH6589	0.861	0.571
RORB M05677_2.00	Homo sapiens	DAWNTRGGTYAGTRGGTCAN	NTGACCYACTRACCYANWTH	SELEX Yin et al.(2017) RORB_eDBD_HT-SELEX_1	0.861	0.571
RORB M05678_2.00	Homo sapiens	NAWNKRGGTCAYGACCYMNWTN	NAWNKRGGTCRTGACCYMNWTN	SELEX Yin et al.(2017) RORB_eDBD_HT-SELEX_2	0.861	0.571
RORB M05883_2.00	Homo sapiens	AWNBRGGTCAN	NTGACCYVNWT	SMiLE-seq Isakova et al.(2017) RORb	0.861	0.571
RORB M11187_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORBETA_Q2	0.861	0.571
RORB M05679_2.00	Homo sapiens	DAWBTRGGTYAGTRGGTCRN	NYGACCYACTRACCYAVWTH	SELEX Yin et al.(2017) RORB_eDBD_Methyl-HT-SELEX_1	0.861	0.571
RORB M05680_2.00	Homo sapiens	NAWNKRGGTCAYGACCYMNWTN	NAWNKRGGTCRTGACCYMNWTN	SELEX Yin et al.(2017) RORB_eDBD_Methyl-HT-SELEX_2	0.861	0.571
RORC M05621_2.00	Homo sapiens	KRGGTCAYGMCCYM	KRGGKCRTGACCYM	SELEX Yin et al.(2017) RORC_eDBD_HT-SELEX_1	0.854	0.571
RORC M05622_2.00	Homo sapiens	NAWNKRGGTYANTRGGTCAN	NTGACCYANTRACCYMNWTN	SELEX Yin et al.(2017) RORC_eDBD_HT-SELEX_2	0.854	0.571
RORC M05880_2.00	Homo sapiens	NDAWNTRGGKCA	TGMCCYANWTHN	SMiLE-seq Isakova et al.(2017) RORc	0.854	0.571
RORC M09282_2.00	Homo sapiens	NDAWSTRRGTCA	TGACYYASWTHN	Misc Kulakovskiy et al.(2013) RORG_HUMAN.H11MO.0.C	0.854	0.571
RORC M05623_2.00	Homo sapiens	TRGGTCAYGACCYA	TRGGTCRTGACCYA	SELEX Yin et al.(2017) RORC_eDBD_Methyl-HT-SELEX_1	0.854	0.571
RORC M05624_2.00	Homo sapiens	NAWNTRGGTYASTAGGTCAN	NTGACCTASTRACCYANWTN	SELEX Yin et al.(2017) RORC_eDBD_Methyl-HT-SELEX_2	0.854	0.571
Hr4 M06435_2.00	Drosophila melanogaster	AAGGTCA	TGACCTT	B1H Zhu et al.(2011) Hr4_SANGER_5_FBgn0023546	0.829	0.571
Nr2f6 M00811_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Weirauch et al.(2013) pTH2193	0.811	0.500
Nr2f6 M03419_2.00	Mus musculus	RAGGTCAADAGGTCA	TGACCTHTTGACCTY	SELEX Jolma et al.(2013) Nr2f6_1	0.811	0.500
Nr2f6 M03420_2.00	Mus musculus	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) Nr2f6_2	0.811	0.500
RORC M02405_2.00	Tetraodon nigroviridis	NGAGGTCANN	NNTGACCTCN	PBM Weirauch et al.(2014) pTH6612	0.801	0.543
usp M03934_2.00	Drosophila melanogaster	ARRGGTCAAAGGTCA	TGACCTTTGACCYYT	SELEX Nitta et al.(2015) usp_1	0.789	0.557
usp M06426_2.00	Drosophila melanogaster	HRRGGTCAH	DTGACCYYD	B1H Zhu et al.(2011) usp_SANGER_5_FBgn0003964	0.789	0.557
usp M02709_2.00	Drosophila melanogaster	GGGGTCACSN	NSGTGACCCC	SELEX Mathelier et al.(2014) MA0016.1	0.789	0.557
usp M09689_2.00	Drosophila melanogaster	KRGGTCACG	CGTGACCYM	Misc Kulakovskiy et al.(2009) usp	0.789	0.557
usp M11191_2.00	Drosophila melanogaster	GRGGTCAYS	SRTGACCYC	Transfac Matys et al.(2006) I$CF1_01	0.789	0.557
usp M11192_2.00	Drosophila melanogaster	GGGGTCAYS	SRTGACCCC	Transfac Matys et al.(2006) I$CF1_02	0.789	0.557
Rxrg M02400_2.00	Mus musculus	VRGGTCAN	NTGACCYB	PBM Weirauch et al.(2014) pTH2880	0.786	0.529
RXRG M03375_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRG_1	0.786	0.529
RXRG M03376_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRG_2	0.786	0.529
RXRG M03377_2.00	Homo sapiens	GRGGTCAAAGGTCA	TGACCTTTGACCYC	SELEX Jolma et al.(2013) RXRG_3	0.786	0.529
RXRG M03378_2.00	Homo sapiens	NRGGTCATGACCYC	GRGGTCATGACCYN	SELEX Jolma et al.(2013) RXRG_4	0.786	0.529
RXRG M02746_2.00	Homo sapiens	GGTCAAAGGTCA	TGACCTTTGACC	SELEX Jolma et al.(2010) RXRG_dimer	0.786	0.529
RXRG M05615_2.00	Homo sapiens	VRGGTCAAAGGTCAN	NTGACCTTTGACCYB	SELEX Yin et al.(2017) RXRG_FL_HT-SELEX_1	0.786	0.529
RXRG M05616_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RXRG_FL_HT-SELEX_2	0.786	0.529
RXRG M05879_2.00	Homo sapiens	RGGTBAARGGTBRND	HNYVACCYTTVACCY	SMiLE-seq Isakova et al.(2017) RXRg	0.786	0.529
RXRG M09280_2.00	Homo sapiens	NGTCAAAGGTCAH	DTGACCTTTGACN	Misc Kulakovskiy et al.(2013) RXRG_HUMAN.H11MO.0.B	0.786	0.529
Rxrg M09305_2.00	Mus musculus	VDDVDNSVNRAGKTCAAGGYCA	TGRCCTTGAMCTYNBSNHBHHB	Misc Kulakovskiy et al.(2013) RXRG_MOUSE.H11MO.0.B	0.786	0.529
RXRG M05617_2.00	Homo sapiens	DRGGTBAARGGTBRN	NYVACCYTTVACCYH	SELEX Yin et al.(2017) RXRG_FL_Methyl-HT-SELEX_1	0.786	0.529
RXRG M05618_2.00	Homo sapiens	VRGGTCAYGACCYB	VRGGTCRTGACCYB	SELEX Yin et al.(2017) RXRG_FL_Methyl-HT-SELEX_2	0.786	0.529
Nr2c1 M00812_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Weirauch et al.(2013) pTH1284	0.780	0.543
Nr2c1 M02399_2.00	Mus musculus	RRGGTCAH	DTGACCYY	PBM Weirauch et al.(2014) pTH3466	0.780	0.543
NR2C1 M05597_2.00	Homo sapiens	NRGKKCRYGAMMYN	NRKKTCRYGMMCYN	SELEX Yin et al.(2017) NR2C1_eDBD_HT-SELEX_1	0.780	0.543
NR2C1 M05598_2.00	Homo sapiens	NRRGGTCAN	NTGACCYYN	SELEX Yin et al.(2017) NR2C1_eDBD_HT-SELEX_2	0.780	0.543
NR2C1 M09273_2.00	Homo sapiens	RBYVRVAGGTCAB	VTGACCTBYBRVY	Misc Kulakovskiy et al.(2013) NR2C1_HUMAN.H11MO.0.C	0.780	0.543
Nr2c1 M09304_2.00	Mus musculus	RBYVRVAGGTCAB	VTGACCTBYBRVY	Misc Kulakovskiy et al.(2013) NR2C1_MOUSE.H11MO.0.C	0.780	0.543
NR2C1 M05599_2.00	Homo sapiens	NRRGGTCAN	NTGACCYYN	SELEX Yin et al.(2017) NR2C1_eDBD_Methyl-HT-SELEX_1	0.780	0.543
NR2C1 M05600_2.00	Homo sapiens	RRGGTCRYGACCYY	RRGGTCRYGACCYY	SELEX Yin et al.(2017) NR2C1_eDBD_Methyl-HT-SELEX_2	0.780	0.543
Rxra M00181_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Badis et al.(2009) Rxra_1035	0.776	0.543
RXRA M03408_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRA_1	0.776	0.543
RXRA M03409_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRA_2	0.776	0.543
RXRA M03410_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRA_3	0.776	0.543
RXRA M03411_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRA_4	0.776	0.543
Rxra M03421_2.00	Mus musculus	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) Rxra_1	0.776	0.543
Rxra M03422_2.00	Mus musculus	RGGTCATGACCY	RGGTCATGACCY	SELEX Jolma et al.(2013) Rxra_2	0.776	0.543
RXRA M05671_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRA_eDBD_HT-SELEX	0.776	0.543
RXRA M05882_2.00	Homo sapiens	VRGKTBAAAGGTYRH	DYRACCTTTVAMCYB	SMiLE-seq Isakova et al.(2017) RXRa	0.776	0.543
RXRA M07993_2.00	Homo sapiens	NRRGGTCA	TGACCYYN	ChIP-seq Gerstein et al.(2012) H1-hESC_RXRA_HudsonAlpha	0.776	0.543
RXRA M07994_2.00	Homo sapiens	DDNNMRRGGTCANDN	NHNTGACCYYKNNHH	ChIP-seq Gerstein et al.(2012) HepG2_RXRA_HudsonAlpha	0.776	0.543
RXRA M09294_2.00	Homo sapiens	VDDDNDNNVRRRGGKCAVDV	BHBTGMCCYYYBNNHNHHHB	Misc Kulakovskiy et al.(2013) RXRA_HUMAN.H11MO.0.A	0.776	0.543
Rxra M09306_2.00	Mus musculus	DDVNNNNNRAGKTCAAGGYCA	TGRCCTTGAMCTYNNNNNBHH	Misc Kulakovskiy et al.(2013) RXRA_MOUSE.H11MO.0.A	0.776	0.543
RXRA M11182_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RXRA_07	0.776	0.543
RXRA M05672_2.00	Homo sapiens	RRGGTCAAAGGTCAH	DTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRA_eDBD_Methyl-HT-SELEX	0.776	0.543
Rxrb M02402_2.00	Mus musculus	VRGGTCAH	DTGACCYB	PBM Weirauch et al.(2014) pTH2861	0.772	0.514
RXRB M03415_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRB_1	0.772	0.514
Rxrb M03435_2.00	Mus musculus	GRGGTCAAAGGTCA	TGACCTTTGACCYC	SELEX Jolma et al.(2013) Rxrb_1	0.772	0.514
RXRB M05681_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_HT-SELEX_1	0.772	0.514
RXRB M05682_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_HT-SELEX_2	0.772	0.514
RXRB M09297_2.00	Homo sapiens	DSAGGTCASD	HSTGACCTSH	Misc Kulakovskiy et al.(2013) RXRB_HUMAN.H11MO.0.C	0.772	0.514
Rxrb M09330_2.00	Mus musculus	DSAGGTCASD	HSTGACCTSH	Misc Kulakovskiy et al.(2013) RXRB_MOUSE.H11MO.0.C	0.772	0.514
RXRB M05683_2.00	Homo sapiens	RRGGTCAAAGGTCRN	NYGACCTTTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_Methyl-HT-SELEX_1	0.772	0.514
RXRB M05684_2.00	Homo sapiens	RRGGTCRYGACCYY	RRGGTCRYGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_Methyl-HT-SELEX_2	0.772	0.514
nr2f2 M02393_2.00	Danio rerio	NNRGGTCAN	NTGACCYNN	PBM Weirauch et al.(2014) pTH5882	0.760	0.571
Nr2f1 M00822_2.00	Mus musculus	DRGGTCRN	NYGACCYH	PBM Weirauch et al.(2013) pTH3811	0.760	0.571
NR2F1 M03403_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Jolma et al.(2013) NR2F1_1	0.760	0.571
NR2F1 M03404_2.00	Homo sapiens	RRGGTCAARAGGTCAN	NTGACCTYTTGACCYY	SELEX Jolma et al.(2013) NR2F1_2	0.760	0.571
NR2F1 M03405_2.00	Homo sapiens	RRGGTCAN	NTGACCYY	SELEX Jolma et al.(2013) NR2F1_3	0.760	0.571
NR2F1 M03406_2.00	Homo sapiens	NHRRGGTCANVNG	CNBNTGACCYYDN	SELEX Jolma et al.(2013) NR2F1_4	0.760	0.571
NR2F1 M05661_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_HT-SELEX_1	0.760	0.571
NR2F1 M05662_2.00	Homo sapiens	VRGGTCANYGACCYY	RRGGTCRNTGACCYB	SELEX Yin et al.(2017) NR2F1_eDBD_HT-SELEX_2	0.760	0.571
NR2F1 M05665_2.00	Homo sapiens	VRGGTCAAAGGTCAN	NTGACCTTTGACCYB	SELEX Yin et al.(2017) NR2F1_FL_HT-SELEX_1	0.760	0.571
NR2F1 M05666_2.00	Homo sapiens	RRGGTCANYGACCYY	RRGGTCRNTGACCYY	SELEX Yin et al.(2017) NR2F1_FL_HT-SELEX_2	0.760	0.571
NR2F1 M09291_2.00	Homo sapiens	NRRRBSRRRGGKCANVN	NBNTGMCCYYYSVYYYN	Misc Kulakovskiy et al.(2013) COT1_HUMAN.H11MO.0.C	0.760	0.571
Nr2f1 M09334_2.00	Mus musculus	YARAGGTCA	TGACCTYTR	Misc Kulakovskiy et al.(2013) COT1_MOUSE.H11MO.0.B	0.760	0.571
NR2F1 M11172_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$COUPTF1_Q6_01	0.760	0.571
NR2F1 M05663_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_Methyl-HT-SELEX_1	0.760	0.571
NR2F1 M05664_2.00	Homo sapiens	NRGGTCANYGACCYH	DRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_Methyl-HT-SELEX_2	0.760	0.571
NR2F1 M05667_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_FL_Methyl-HT-SELEX_1	0.760	0.571
NR2F1 M05668_2.00	Homo sapiens	RRGGTCRNYGACCYY	RRGGTCRNYGACCYY	SELEX Yin et al.(2017) NR2F1_FL_Methyl-HT-SELEX_2	0.760	0.571
Nr2f2 M00184_2.00	Mus musculus	RRGGTCAN	NTGACCYY	PBM Badis et al.(2009) Nr2f2_2192	0.754	0.571
NR2F2 M08157_2.00	Homo sapiens	NNAAGGTCANN	NNTGACCTTNN	ChIP-seq Mathelier et al.(2014) MA1111.1	0.754	0.571
NR2F2 M08223_2.00	Homo sapiens	AAAGGTCA	TGACCTTT	ChIP-seq Contrino et al.(2012) Mv102	0.754	0.571
NR2F2 M08224_2.00	Homo sapiens	GGKCARAGGB	VCCTYTGMCC	ChIP-seq Contrino et al.(2012) Mv104	0.754	0.571
NR2F2 M09293_2.00	Homo sapiens	NARRGGTCADRDN	NHYHTGACCYYTN	Misc Kulakovskiy et al.(2013) COT2_HUMAN.H11MO.0.A	0.754	0.571
Nr2f2 M09325_2.00	Mus musculus	NNHRAGGTCANVD	HBNTGACCTYDNN	Misc Kulakovskiy et al.(2013) COT2_MOUSE.H11MO.0.A	0.754	0.571
NR2F2 M11180_2.00	Homo sapiens	WRRKKTCAARGGYTCA	TGARCCYTTGAMMYYW	Transfac Matys et al.(2006) V$ARP1_01	0.754	0.571
NR2F2 M11181_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$COUPTF2_Q6	0.754	0.571
For this family, TFs with SR scores > 0.745* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
D917_03517	Nuclear receptor	38	107	DCCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYQCSADQNCPIDKTCRKRCPHCRFQKCLKVGMKI

Links
Other Nuclear receptor family TFs
Other *Trichinella nativa* TFs

1232 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
GH12132	Drosophila grimshawi	FBgn0119611	N
CG4004	Drosophila melanogaster	FBgn0030418	N

D917_03517 (Trichinella nativa) Nuclear receptor

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1232 Related TFs

D917_03517 **(Trichinella nativa)
Nuclear receptor**