L892_g5079 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g5079 T309299_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.964 0.700
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.833 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g5079.t1 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr2G00400_001 Musa acuminata GSMUA_Achr2G00400_001 N
GSMUA_Achr4G12210_001 Musa acuminata GSMUA_Achr4G12210_001 N
GSMUA_Achr5G10220_001 Musa acuminata GSMUA_Achr5G10220_001 N
GSMUA_Achr5G12850_001 Musa acuminata GSMUA_Achr5G12850_001 N
GSMUA_Achr7G04630_001 Musa acuminata GSMUA_Achr7G04630_001 N
GSMUA_AchrUn_randomG04070_001 Musa acuminata GSMUA_AchrUn_randomG04070_001 N
OPUNC10G15350 Oryza punctata OPUNC10G15350 N