CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0001018601
(
Syphacia muris
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SMUV_0001018601
T310435_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0001018601-mRNA-1
Nuclear receptor
1
53
MVCGDRACSHHYYGVAACHGCKCFFWRSVKTNAQYVCRFGGNCAIDVISQISH
Links
Other
Nuclear receptor
family TFs
Other
Syphacia muris
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0000041701
Anisakis simplex
ASIM_0000041701
N
0.941
BXY_0179600
Bursaphelenchus xylophilus
BXY_0179600
I
0.911
GPLIN_000686000
Globodera pallida
GPLIN_000686000
N
0.884
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
I
0.792
Minc11986
Meloidogyne incognita
Minc11986
I
0.792
L596_g25326
Steinernema carpocapsae
L596_g25326
N
0.942
L889_g23169
Steinernema feltiae
L889_g23169
N
0.942
L893_g2097
Steinernema glaseri
L893_g2097
N
0.942
L898_g11980
Steinernema monticolum
L898_g11980
N
0.942
L892_g27553
Steinernema scapterisci
L892_g27553
N
0.942
TCNE_0000088101
Toxocara canis
TCNE_0000088101
N
0.937