TCLT_0000079701 (Thelazia callipaeda)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 TCLT_0000079701 T310750_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.992 0.871
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000079701-mRNA-1 Nuclear receptor 188 258

Links

Other Nuclear receptor family TFs
Other Thelazia callipaeda TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N
BHLH2 Arabidopsis thaliana AT1G63650 N
GL3 Arabidopsis thaliana AT5G41315 I
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I
Bo9g086920 Brassica oleracea Bo9g086920 N
Bo9g086910 Brassica oleracea Bo9g086910 N
Bo4g141990 Brassica oleracea Bo4g141990 I
Bra025508 Brassica rapa Bra025508 I
Bra037887 Brassica rapa Bra037887 N
PK09702.1 Cannabis sativa PK09702.1 D
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N
Carubv10002462m.g Capsella rubella Carubv10002462m.g I
Carubv10004345m.g Capsella rubella Carubv10004345m.g I
Carubv10019965m.g Capsella rubella Carubv10019965m.g N
Ca_07836 Cicer arietinum Ca_07836 I
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I
GLYMA19G33770 Glycine max GLYMA19G33770 I
GLYMA10G03140 Glycine max GLYMA10G03140 I
GLYMA02G16670 Glycine max GLYMA02G16670 I
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I
LPERR07G06180 Leersia perrieri LPERR07G06180 I
MDP0000225680 Malus domestica MDP0000225680 I
MDP0000617077 Malus domestica MDP0000617077 I
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I
MTR_1g072320 Medicago truncatula MTR_1g072320 I
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I
GSMUA_Achr3G17620_001 Musa acuminata GSMUA_Achr3G17620_001 I
OBART07G07130 Oryza barthii OBART07G07130 I
OMERI07G05880 Oryza meridionalis OMERI07G05880 I
ONIVA07G05400 Oryza nivara ONIVA07G05400 I
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I
Pm020164 Prunus mume Pm020164 I
Pm023805 Prunus mume Pm023805 I
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I
29647.m002101 Ricinus communis 29647.m002101 I
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I
SELMODRAFT_73360 Selaginella moellendorffii SELMODRAFT_73360 N
SELMODRAFT_87033 Selaginella moellendorffii SELMODRAFT_87033 N
Si029106m.g Setaria italica Si029106m.g I
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I
Sb02g006390 Sorghum bicolor Sb02g006390 I
TCM_004403 Theobroma cacao TCM_004403 I
TT8 Vitis vinifera VIT_07s0104g00090 I