CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TP53
(
Cavia porcellus
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSCPOG00000014252
T311009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.892
0.892
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.892
0.892
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.892
0.892
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.892
0.892
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.892
0.892
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.892
0.892
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.892
0.892
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.892
0.892
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.892
0.892
Trp53
M03439_2.00
Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT
SELEX
Jolma et al.(2013)
Tp53_1
0.851
0.851
Trp53
M03440_2.00
Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT
SELEX
Jolma et al.(2013)
Tp53_2
0.851
0.851
Trp53
M03441_2.00
Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY
SELEX
Jolma et al.(2013)
Tp53_3
0.851
0.851
Trp53
M09340_2.00
Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY
Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A
0.851
0.851
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000012841
p53
93
287
SSVPSHKPYRGSYGFEVHFLKSGTAKSVTCTYSPGLNKLFCQLAKTCPVQVWVESPPPPGTRVRALAIYKKSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLHAEYVDDRTTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGKLLGRDSFEVRVCACPGRDRRTEEENF
Links
Other
p53
family TFs
Other
Cavia porcellus
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000011098
Ailuropoda melanoleuca
ENSAMEG00000011098
I
Alligator_sinensis_CCG001947.1
Alligator sinensis
Alligator_sinensis_CCG001947.1
I
ENSAPLG00000011819
Anas platyrhynchos
ENSAPLG00000011819
I
ZBTB2
Anolis carolinensis
ENSACAG00000006317
I
Afo_R014821
Aptenodytes forsteri
Afo_R014821
I
ENSAMXG00000006249
Astyanax mexicanus
ENSAMXG00000006249
I
ENSP00000323183-D1
Bos grunniens
ENSP00000323183-D1
I
ZBTB2
Bos taurus
ENSBTAG00000014790
I
Brh_R011452
Buceros rhinoceros
Brh_R011452
I
ZBTB2
Callithrix jacchus
ENSCJAG00000013393
I
Aan_R009700
Calypte anna
Aan_R009700
I
ZBTB2
Canis familiaris
ENSCAFG00000000422
I
ENSCPOG00000002040
Cavia porcellus
ENSCPOG00000002040
I
Cmyd_10007876
Chelonia mydas
Cmyd_10007876
I
ENSCSAG00000014259
Chlorocebus sabaeus
ENSCSAG00000014259
I
zbtb2b
Danio rerio
ENSDARG00000028086
I
ZBTB2
Dasypus novemcinctus
ENSDNOG00000047729
I
Zbtb2
Dipodomys ordii
ENSDORG00000013305
I
ZBTB2
Felis catus
ENSFCAG00000022354
I
ENSFALG00000012253
Ficedula albicollis
ENSFALG00000012253
I
ENSGMOG00000007509
Gadus morhua
ENSGMOG00000007509
I
ZBTB2
Gallus gallus
ENSGALG00000012966
I
zbtb2b
Gasterosteus aculeatus
ENSGACG00000008691
I
Gfo_R006405
Geospiza fortis
Gfo_R006405
I
ZBTB2
Gorilla gorilla
ENSGGOG00000010529
I
ZBTB2
Homo sapiens
ENSG00000181472
D
ENSSTOG00000021611
Ictidomys tridecemlineatus
ENSSTOG00000021611
I
ENSLOCG00000016295
Lepisosteus oculatus
ENSLOCG00000016295
I
ZBTB2
Loxodonta africana
ENSLAFG00000001805
I
ENSP00000323183
Macaca fascicularis
ENSP00000323183
I
ZBTB2
Macaca mulatta
ENSMMUG00000029475
I
ENSMEUG00000012838
Macropus eugenii
ENSMEUG00000012838
I
ZBTB2
Meleagris gallopavo
ENSMGAG00000012677
I
ENSMICG00000010578
Microcebus murinus
ENSMICG00000010578
I
ZBTB2
Monodelphis domestica
ENSMODG00000016757
I
ENSMPUG00000010444
Mustela putorius furo
ENSMPUG00000010444
I
Zbtb2
Mus musculus
ENSMUSG00000075327
I
Myotis_brandtii_ZBTB2_10021316
Myotis brandtii
Myotis_brandtii_ZBTB2_10021316
I
ZBTB2
Myotis lucifugus
ENSMLUG00000001314
I
ENSNLEG00000015384
Nomascus leucogenys
ENSNLEG00000015384
I
Ogr17347
Ophisaurus gracilis
Ogr17347
I
ENSONIG00000013371
Oreochromis niloticus
ENSONIG00000013371
I
ZBTB2
Ornithorhynchus anatinus
ENSOANG00000003326
I
ZBTB2
Oryctolagus cuniculus
ENSOCUG00000022931
I
ZBTB2
Otolemur garnettii
ENSOGAG00000005262
I
ENSOARG00000003148
Ovis aries
ENSOARG00000003148
I
ZBTB2
Pan troglodytes
ENSPTRG00000018712
I
ENSPSIG00000018246
Pelodiscus sinensis
ENSPSIG00000018246
I
Pvit_17227
Pogona vitticeps
Pvit_17227
I
ENSPPYG00000017107
Pongo abelii
ENSPPYG00000017107
I
ZBTB2
Procavia capensis
ENSPCAG00000013849
I
Zbtb2
Rattus norvegicus
ENSRNOG00000019544
I
ENSSHAG00000013043
Sarcophilus harrisii
ENSSHAG00000013043
I
ZBTB2
Sus scrofa
ENSSSCG00000004090
I
ZBTB2
Taeniopygia guttata
ENSTGUG00000011276
I
zbtb2b
Takifugu rubripes
ENSTRUG00000018234
I
ENSTSYG00000000113
Tarsius syrichta
ENSTSYG00000000113
I
zbtb2b
Tetraodon nigroviridis
ENSTNIG00000012263
I
ZBTB2
Tursiops truncatus
ENSTTRG00000014190
I
Tal_R001183
Tyto alba
Tal_R001183
I
zbtb2.L
Xenopus laevis
XB-GENE-6255749
I
zbtb2
Xenopus tropicalis
XB-GENE-977864
I