AGAP006454 (Anopheles gambiae)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 AGAP006454 T313180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BtbVII
M03951_2.00 		Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY		 SELEX
Nitta et al.(2015)
BtbVII_1 		0.933 0.933
BtbVII
M03952_2.00 		Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT		 SELEX
Nitta et al.(2015)
BtbVII_2 		0.933 0.933
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGAP006454-PA Pipsqueak 667 712

Links

Other Pipsqueak family TFs
Other Anopheles gambiae TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb01g018540 Sorghum bicolor Sb01g018540 N
Sb01g021617 Sorghum bicolor Sb01g021617 N
Sb01g045868 Sorghum bicolor Sb01g045868 N
Sb02g023634 Sorghum bicolor Sb02g023634 N
Sb03g011225 Sorghum bicolor Sb03g011225 N
Sb03g029595 Sorghum bicolor Sb03g029595 N
Sb03g032960 Sorghum bicolor Sb03g032960 N
Sb03g037423 Sorghum bicolor Sb03g037423 N
Sb04g024745 Sorghum bicolor Sb04g024745 N
Sb06g001517 Sorghum bicolor Sb06g001517 N
Sb06g020246 Sorghum bicolor Sb06g020246 N
Sb07g019155 Sorghum bicolor Sb07g019155 N
Sb10g008300 Sorghum bicolor Sb10g008300 N