CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCSADRAFT_86221
(
Bipolaris sorokiniana
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
COCSADRAFT_86221
T313452_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD66026
Pipsqueak
2
38
ASYYNNPKQSIYSLAKAYDVPKSTLQTRLRGIQPRSE
Links
Other
Pipsqueak
family TFs
Other
Bipolaris sorokiniana
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN02452
Caenorhabditis brenneri
CBN02452
N
CBG02664
Caenorhabditis briggsae
CBG02664
N
nhr-22
Caenorhabditis elegans
WBGene00003621
N
CJA16634
Caenorhabditis japonica
CJA16634
N
CRE26280
Caenorhabditis remanei
CRE26280
N
scaffold1397-EXSNAP2012.2
Pristionchus exspectatus
scaffold1397-EXSNAP2012.2
N
scaffold695-EXSNAP2012.2
Pristionchus exspectatus
scaffold695-EXSNAP2012.2
N