LCORL (Sus scrofa)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSSSCG00000008748 T313618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000009324 Pipsqueak 278 315
ENSSSCP00000009324 Pipsqueak 527 572

Links

Other Pipsqueak family TFs
Other Sus scrofa TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSDORG00000007901 Dipodomys ordii ENSDORG00000007901 I 0.000
ENSFALG00000014224 Ficedula albicollis ENSFALG00000014224 I 0.000
HOXB6 Ochotona princeps ENSOPRG00000000399 I 0.000
HOXB7 Ornithorhynchus anatinus ENSOANG00000000390 I 0.000
HOXB1 Tupaia belangeri ENSTBEG00000002340 I 0.000