GE20362 (Drosophila yakuba)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 FBgn0237678 T313740_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pfk
M06442_2.00 		Drosophila melanogaster
GGAAYRNTKGGAWKK
MMWTCCMANYRTTCC		 B1H
Zhu et al.(2011)
pfk_SANGER_5_FBgn0035405 		0.978 0.978
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0265372 Pipsqueak 348 392
FBpp0265372 Pipsqueak 457 501

Links

Other Pipsqueak family TFs
Other Drosophila yakuba TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.13.473.1 Phytophthora capsici e_gw1.13.473.1 I
F443_18023 Phytophthora parasitica F443_18023 I
Physo158810 Phytophthora sojae Physo158810 N
maker-par_contig_481-snap-gene-0.6 Pythium arrhenomanes maker-par_contig_481-snap-gene-0.6 N
snap_masked-pir_contig_160-abinit-gene-0.52 Pythium irregulare snap_masked-pir_contig_160-abinit-gene-0.52 I
fgenesh-piw_contig_33-abinit-gene-0.101 Pythium iwayamai fgenesh-piw_contig_33-abinit-gene-0.101 I
PYU1_G013892 Pythium ultimum PYU1_G013892 I
maker-pve_contig_111-snap-gene-0.29 Pythium vexans maker-pve_contig_111-snap-gene-0.29 I
maker-pve_contig_204-fgenesh-gene-0.12 Pythium vexans maker-pve_contig_204-fgenesh-gene-0.12 N
SPRG_02869 Saprolegnia parasitica SPRG_02869 I