fgenesh_scip_prom.28083.11902 (Phytophthora lateralis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 fgenesh_scip_prom.28083.11902 T313757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.28083.11902 Pipsqueak 274 316

Links

Other Pipsqueak family TFs
Other Phytophthora lateralis TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_009780 Albugo laibachii ALNC14_009780 I
ALNC14_087270 Albugo laibachii ALNC14_087270 I
HpaG813239 Hyaloperonospora arabidopsidis HpaG813239 I
HpaG806491 Hyaloperonospora arabidopsidis HpaG806491 I
estExt_Genewise1Plus.C_40041 Phytophthora capsici estExt_Genewise1Plus.C_40041 I
e_gw1.13.473.1 Phytophthora capsici e_gw1.13.473.1 I
estExt_Genewise1.C_230193 Phytophthora capsici estExt_Genewise1.C_230193 I
PITG_16114 Phytophthora infestans PITG_16114 I
PITG_13133 Phytophthora infestans PITG_13133 I
fgenesh_scip_prom.28083.4781 Phytophthora lateralis fgenesh_scip_prom.28083.4781 I
fgenesh_scip_prom.28083.3149 Phytophthora lateralis fgenesh_scip_prom.28083.3149 I
F443_18023 Phytophthora parasitica F443_18023 I
F443_05404 Phytophthora parasitica F443_05404 I
Phyra71435 Phytophthora ramorum Phyra71435 I
Phyra73031 Phytophthora ramorum Phyra73031 D
Physo127870 Phytophthora sojae Physo127870 I
Physo128670 Phytophthora sojae Physo128670 I
maker-pag1_scaffold_208-fgenesh-gene-0.6 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.6 I
maker-pag1_scaffold_987-fgenesh-gene-0.0 Pythium aphanidermatum maker-pag1_scaffold_987-fgenesh-gene-0.0 I
maker-par_contig_481-snap-gene-0.6 Pythium arrhenomanes maker-par_contig_481-snap-gene-0.6 N
maker-par_contig_505-fgenesh-gene-0.4 Pythium arrhenomanes maker-par_contig_505-fgenesh-gene-0.4 I
snap_masked-pir_contig_160-abinit-gene-0.52 Pythium irregulare snap_masked-pir_contig_160-abinit-gene-0.52 I
maker-pir_contig_78-snap-gene-0.19 Pythium irregulare maker-pir_contig_78-snap-gene-0.19 I
fgenesh-piw_contig_33-abinit-gene-0.101 Pythium iwayamai fgenesh-piw_contig_33-abinit-gene-0.101 I
PYU1_G009485 Pythium ultimum PYU1_G009485 I
PYU1_G013892 Pythium ultimum PYU1_G013892 I
maker-pve_contig_111-snap-gene-0.29 Pythium vexans maker-pve_contig_111-snap-gene-0.29 I
snap_masked-pve_contig_1-abinit-gene-1.66 Pythium vexans snap_masked-pve_contig_1-abinit-gene-1.66 I
SPRG_02869 Saprolegnia parasitica SPRG_02869 I
SPRG_12165 Saprolegnia parasitica SPRG_12165 I