nasonia_NCBI_hmm1312624 (Nasonia vitripennis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 nasonia_NCBI_hmm1312624 T313940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00		 Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Eip93F
M06443_2.00 		Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB		 B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948 		0.978 0.978
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02436_2.00 Pipsqueak 51 96

DNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm1312624 Pipsqueak 360 405

Links

Other Pipsqueak family TFs
Other Nasonia vitripennis TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FOMPIDRAFT_42562 Fomitopsis pinicola FOMPIDRAFT_42562 N