CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cflo_05310--NP_001011629.1_APIME
(
Camponotus floridanus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Cflo_05310--NP_001011629.1_APIME
T314423_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_05310--NP_001011629.1_APIME
Pipsqueak
603
642
TEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVDDK
Cflo_05310--NP_001011629.1_APIME
Pipsqueak
962
1007
DRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Camponotus floridanus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bHLH11
Arabidopsis lyrata
fgenesh2_kg.7__460__AT4G36060.2
N
0.000
bHLH11
Arabidopsis thaliana
AT4G36060
N
0.000
Bostr.7867s1468
Boechera stricta
Bostr.7867s1468
N
0.000
Cagra.2236s0005
Capsella grandiflora
Cagra.2236s0005
N
0.000