CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC001996
(
Leptinotarsa decemlineata
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
LDEC001996
T314531_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC001996-PA
Pipsqueak
11
56
TEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERER
LDEC001996-PA
Pipsqueak
358
403
DRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Leptinotarsa decemlineata
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI002959
Acyrthosiphon pisum
ACYPI002959
N
0.977
AAEL004572
Aedes aegypti
AAEL004572
N
0.900
AALB002132
Anopheles albimanus
AALB002132
N
0.833
AARA006416
Anopheles arabiensis
AARA006416
N
0.867
AATE004455
Anopheles atroparvus
AATE004455
N
0.854
ACHR002542
Anopheles christyi
ACHR002542
N
0.867
ACOM029624
Anopheles coluzzii
ACOM029624
N
0.867
ACUA022751
Anopheles culicifacies
ACUA022751
N
0.856
ADIR006726
Anopheles dirus
ADIR006726
N
0.878
AEPI008759
Anopheles epiroticus
AEPI008759
N
0.867
AFAF006670
Anopheles farauti
AFAF006670
N
0.878
AFUN004467
Anopheles funestus
AFUN004467
N
0.856
AGAP004494
Anopheles gambiae
AGAP004494
N
0.867
AMEM016490
Anopheles merus
AMEM016490
N
0.867
AMIN004869
Anopheles minimus
AMIN004869
N
0.856
AQUA009670
Anopheles quadriannulatus
AQUA009670
N
0.867
ASTEI04863
Anopheles stephensi
ASTEI04863
N
0.909
GB50048
Apis mellifera
GB50048
N
0.978
BGIBMGA010815
Bombyx mori
BGIBMGA010815
N
0.919
Cflo_05310--NP_001011629.1_APIME
Camponotus floridanus
Cflo_05310--NP_001011629.1_APIME
N
0.906
CLEC012958
Cimex lectularius
CLEC012958
N
0.966
CpipJ_CPIJ012997
Culex pipiens
CpipJ_CPIJ012997
N
0.889
CPIJ012997
Culex quinquefasciatus
CPIJ012997
N
0.889
KGM_00875
Danaus plexippus
KGM_00875
N
0.888
YQE_12847
Dendroctonus ponderosae
YQE_12847
N
0.989
HHAL003515-PA
Halyomorpha halys
HHAL003515-PA
N
0.965
HMEL013143
Heliconius melpomene
HMEL013143
N
0.865
ISCW019047
Ixodes scapularis
ISCW019047
N
0.908
PHUM461050
Pediculus humanus
PHUM461050
N
1.000
PPAI001250
Phlebotomus papatasi
PPAI001250
N
0.911
RPRC010858
Rhodnius prolixus
RPRC010858
N
0.966
SMAR000814
Strigamia maritima
SMAR000814
N
0.953
tetur01g15360
Tetranychus urticae
tetur01g15360
N
0.826
TC012464
Tribolium castaneum
TC012464
N
1.000
L798_02049
Zootermopsis nevadensis
L798_02049
N
0.956