CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000936701
(
Schistosoma rodhaini
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
SROB_0000936701
T315146_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000936701-mRNA-1
Pipsqueak
142
183
RRELLELAVNDVLGSQISMRRAAQKYNLAKSSLCDYVRKNGI
Links
Other
Pipsqueak
family TFs
Other
Schistosoma rodhaini
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.00118.127.1
Aspergillus carbonarius
e_gw1.00118.127.1
I
ACLA_083930
Aspergillus clavatus
CADACLAG00007511
I
AFUA_6G10140
Aspergillus fumigatus
CADAFUAG00002354
I
ANIA_07189
Aspergillus nidulans
CADANIAG00000265
D
CADANGAG00008442
Aspergillus niger
CADANGAG00008442
I
CADAORAG00007402
Aspergillus oryzae
CADAORAG00007402
I
ATEG_02491
Aspergillus terreus
CADATEAG00004218
I
NFIA_055920
Neosartorya fischeri
CADNFIAG00004495
I
Pc20g15510
Penicillium chrysogenum
Pc20g15510
I
PDIP_47160
Penicillium digitatum
PDIP_47160
I
PEX1_020620
Penicillium expansum
PEX1_020620
I
PITC_017240
Penicillium italicum
PITC_017240
I
PDE_03298
Penicillium oxalicum
PDE_03298
I
PCH_Pc20g15510
Penicillium rubens
PCH_Pc20g15510
I
U727_0043053021
Penicillium solitum
U727_0043053021
I