CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.3134s0010
(
Capsella grandiflora
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Cagra.3134s0010
T315976_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3134s0010.1.p
PLATZ
6
70
LISPKVINKANVIVSSSTTYLRRHCQQQDSDFLQHCFLCRRKLLPAKDIYMYKGDRAFCSVECRS
Links
Other
PLATZ
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000012978
Ictidomys tridecemlineatus
ENSSTOG00000012978
N
ENSPMAG00000003940
Petromyzon marinus
ENSPMAG00000003940
N
MTA1
Pteropus vampyrus
ENSPVAG00000014233
N
nRc.2.0.1.g10457
Romanomermis culicivorax
nRc.2.0.1.g10457
N
ENSSSCG00000027800
Sus scrofa
ENSSSCG00000027800
N
mta3
Takifugu rubripes
ENSTRUG00000001684
N
MTA2
Tursiops truncatus
ENSTTRG00000002461
N