CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prox1b
(
Danio rerio
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSDARG00000088810
T316450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.708
0.708
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.708
0.708
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000106319
Prospero
498
653
GLSPCHLKKAKLMFFYTRYPSSSTLKTYFPDVKFNRCVTSQLIKWFSNFREFFYIQMERFARQAAREVLTSARERALRLGRDTELYRILNMHYNKSNDYQVPERFVEISEVALREFFTAIQSGRDADPCWKKSIYKIICKLDSPVPDSFRLPGCPT
ENSDARP00000137116
Prospero
498
653
GLSPCHLKKAKLMFFYTRYPSSSTLKTYFPDVKFNRCVTSQLIKWFSNFREFFYIQMERFARQAAREVLTSARERALRLGRDTELYRILNMHYNKSNDYQVPERFVEISEVALREFFTAIQSGRDADPCWKKSIYKIICKLDSPVPDSFRLPGCPT
Links
Other
Prospero
family TFs
Other
Danio rerio
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004929
Ailuropoda melanoleuca
ENSAMEG00000004929
I
ENSBTAP00000018112-D1
Bos grunniens
ENSBTAP00000018112-D1
I
ZNF264
Callithrix jacchus
ENSCJAG00000000022
I
ZNF264
Canis familiaris
ENSCAFG00000030732
I
ENSCSAG00000001654
Chlorocebus sabaeus
ENSCSAG00000001654
I
ZNF264
Equus caballus
ENSECAG00000021397
I
ZNF264
Felis catus
ENSFCAG00000013572
I
ZNF264
Gorilla gorilla
ENSGGOG00000006173
I
ZNF264
Homo sapiens
ENSG00000083844
D
ENSP00000263095
Macaca fascicularis
ENSP00000263095
I
ZNF805
Macaca mulatta
ENSMMUG00000006010
I
ENSMPUG00000006448
Mustela putorius furo
ENSMPUG00000006448
I
ZNF264
Myotis lucifugus
ENSMLUG00000016720
I
ENSNLEG00000010888
Nomascus leucogenys
ENSNLEG00000010888
I
ZNF264
Oryctolagus cuniculus
ENSOCUG00000029243
I
ZNF264
Otolemur garnettii
ENSOGAG00000011115
I
ZNF264
Pan troglodytes
ENSPTRG00000011546
I
ENSPANG00000011940
Papio anubis
ENSPANG00000011940
I
ZNF264
Pteropus vampyrus
ENSPVAG00000003021
I