CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGACG00000014345
(
Gasterosteus aculeatus
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSGACG00000014345
T316468_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.883
0.883
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.883
0.883
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.883
0.883
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000018928
Prospero
612
765
GLSPNHLKKAKLMFFYTRYPSSNMLKIFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQSINEGVTASEELVVSRDAELFRALNMHYNKANDFEVPERFLEVSQVTLREFFNAIVAGKDADPSWKKAIYKVICKLDSEVPDVFKSPNCLQ
Links
Other
Prospero
family TFs
Other
Gasterosteus aculeatus
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_31340
Aegilops tauschii
F775_31340
N
BRADI3G14590
Brachypodium distachyon
BRADI3G14590
N
Gorai.009G176000
Gossypium raimondii
Gorai.009G176000
N
MLOC_6315
Hordeum vulgare
MLOC_6315
N
LPERR02G01020
Leersia perrieri
LPERR02G01020
N
LPERR08G02470
Leersia perrieri
LPERR08G02470
N
GSMUA_Achr8G33180_001
Musa acuminata
GSMUA_Achr8G33180_001
I
OBART02G01220
Oryza barthii
OBART02G01220
N
OB08G12550
Oryza brachyantha
OB08G12550
N
ORGLA02G0011200
Oryza glaberrima
ORGLA02G0011200
N
ORGLA08G0018000
Oryza glaberrima
ORGLA08G0018000
N
OGLUM02G01100
Oryza glumaepatula
OGLUM02G01100
N
OGLUM08G02420
Oryza glumaepatula
OGLUM08G02420
N
BGIOSGA007247
Oryza indica
BGIOSGA007247
N
BGIOSGA027691
Oryza indica
BGIOSGA027691
N
OLONG_000275
Oryza longistaminata
OLONG_000275
N
OLONG_003616
Oryza longistaminata
OLONG_003616
N
OMERI02G00630
Oryza meridionalis
OMERI02G00630
N
ONIVA02G01100
Oryza nivara
ONIVA02G01100
N
ONIVA08G02550
Oryza nivara
ONIVA08G02550
N
OPUNC08G02220
Oryza punctata
OPUNC08G02220
N
OPUNC02G00650
Oryza punctata
OPUNC02G00650
N
ORUFI02G01220
Oryza rufipogon
ORUFI02G01220
N
ORUFI08G02650
Oryza rufipogon
ORUFI08G02650
N
OS02G0116600
Oryza sativa
OS02G0116600
N
OS08G0138500
Oryza sativa
OS08G0138500
N
Pavir.J05070
Panicum virgatum
Pavir.J05070
N
Pavir.Fb00223
Panicum virgatum
Pavir.Fb00223
N
Pavir.Fa02284
Panicum virgatum
Pavir.Fa02284
N
Pavir.Ab02693
Panicum virgatum
Pavir.Ab02693
N
Pavir.Ab00172
Panicum virgatum
Pavir.Ab00172
N
Pavir.Aa03509
Panicum virgatum
Pavir.Aa03509
N
Si014339m.g
Setaria italica
Si014339m.g
N
Si018232m.g
Setaria italica
Si018232m.g
N
Sb04g001200
Sorghum bicolor
Sb04g001200
N
Traes_7BL_6324A95B5
Triticum aestivum
Traes_7BL_6324A95B5
N
Traes_7DL_88B60203A
Triticum aestivum
Traes_7DL_88B60203A
N
Traes_7AL_B9345EB83
Triticum aestivum
Traes_7AL_B9345EB83
N
TRIUR3_32784
Triticum urartu
TRIUR3_32784
N
GRMZM2G314882
Zea mays
GRMZM2G314882
N
GRMZM5G856837
Zea mays
GRMZM5G856837
N