CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000010701
(
Lepisosteus oculatus
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSLOCG00000010701
T316485_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.838
0.838
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.838
0.838
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.838
0.838
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000013112
Prospero
520
673
GLTPNHLKKAKLMFFYTRYPSSNVLKTFFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAILDGVTNVKDLSVTRDSELFRALNMHYNKANDFQVPDRFLEVAEITLQEFFNAISLSKDSDPSWKKAIYKVICKLDSEVPEEFKSSACLF
Links
Other
Prospero
family TFs
Other
Lepisosteus oculatus
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTNIG00000019687
Tetraodon nigroviridis
ENSTNIG00000019687
I
0.000