CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prox2
(
Oryzias latipes
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSORLG00000016587
T316523_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.773
0.773
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.773
0.773
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.773
0.773
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000020766
Prospero
492
645
GLTPSHLKKAKLMFFYTRYPSSNVLKTYFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAIADGIRDVKDITVSRDSELFRALNMHYNKANDFHVPDRFLEVAEITLHEFYNAISASKDSDSSWKKSIYKVICKMDSEVPEEFKTSSCIF
Links
Other
Prospero
family TFs
Other
Oryzias latipes
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000003728
Ailuropoda melanoleuca
ENSAMEG00000003728
N
L3MBTL1
Anolis carolinensis
ENSACAG00000002143
N
AMEM007577
Anopheles merus
AMEM007577
N
ENSAMXG00000008822
Astyanax mexicanus
ENSAMXG00000008822
N
estExt_fgenesh2_pg.C_5980016
Branchiostoma floridae
estExt_fgenesh2_pg.C_5980016
N
L3MBTL1
Callithrix jacchus
ENSCJAG00000003964
N
MYT1L
Callithrix jacchus
ENSCJAG00000007286
N
L3MBTL1
Canis familiaris
ENSCAFG00000009291
N
ENSCSAG00000014035
Chlorocebus sabaeus
ENSCSAG00000014035
N
L3MBTL1
Choloepus hoffmanni
ENSCHOG00000005052
N
l3mbtl1a
Danio rerio
ENSDARG00000014828
N
L3mbtl1
Dipodomys ordii
ENSDORG00000002707
N
ENSETEG00000013916
Echinops telfairi
ENSETEG00000013916
N
L3MBTL1
Equus caballus
ENSECAG00000008175
N
L3MBTL1
Erinaceus europaeus
ENSEEUG00000006232
N
ENSGMOG00000006059
Gadus morhua
ENSGMOG00000006059
N
ENSGACG00000006074
Gasterosteus aculeatus
ENSGACG00000006074
N
L3MBTL1
Gorilla gorilla
ENSGGOG00000034980
N
MYT1L
Homo sapiens
ENSG00000186487
I
L3MBTL1
Homo sapiens
ENSG00000185513
N
ENSSTOG00000011672
Ictidomys tridecemlineatus
ENSSTOG00000011672
N
ENSP00000362227
Macaca fascicularis
ENSP00000362227
N
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
L3MBTL1
Microcebus murinus
ENSMICG00000015115
N
L3MBTL1
Monodelphis domestica
ENSMODG00000003647
N
ENSMPUG00000017691
Mustela putorius furo
ENSMPUG00000017691
N
L3mbtl1
Mus musculus
ENSMUSG00000035576
N
Myotis_brandtii_L3MBTL1_10025184
Myotis brandtii
Myotis_brandtii_L3MBTL1_10025184
N
ENSMLUG00000016624
Myotis lucifugus
ENSMLUG00000016624
N
ENSNLEG00000006529
Nomascus leucogenys
ENSNLEG00000006529
N
L3MBTL1
Ochotona princeps
ENSOPRG00000002367
N
Ocbimv22028662m.g
Octopus bimaculoides
Ocbimv22028662m.g
N
Ogr13959
Ophisaurus gracilis
Ogr13959
N
ENSONIG00000001923
Oreochromis niloticus
ENSONIG00000001923
N
L3MBTL1
Ornithorhynchus anatinus
ENSOANG00000014344
N
L3MBTL1
Oryctolagus cuniculus
ENSOCUG00000006662
N
ENSORLG00000003513
Oryzias latipes
ENSORLG00000003513
N
L3MBTL1
Otolemur garnettii
ENSOGAG00000014470
N
ENSOARG00000003176
Ovis aries
ENSOARG00000003176
N
L3MBTL1
Pan troglodytes
ENSPTRG00000013507
N
ENSPANG00000026135
Papio anubis
ENSPANG00000026135
N
ENSPSIG00000016444
Pelodiscus sinensis
ENSPSIG00000016444
N
ENSPFOG00000022630
Poecilia formosa
ENSPFOG00000022630
N
L3MBTL1
Procavia capensis
ENSPCAG00000013248
N
L3MBTL1
Pteropus vampyrus
ENSPVAG00000015234
N
L3mbtl1
Rattus norvegicus
ENSRNOG00000007044
N
SVUK_0001589601
Strongylus vulgaris
SVUK_0001589601
N
ENSSSCG00000007365
Sus scrofa
ENSSSCG00000007365
N
TsM_000155300
Taenia solium
TsM_000155300
N
ENSTSYG00000014180
Tarsius syrichta
ENSTSYG00000014180
N
ENSTNIG00000012014
Tetraodon nigroviridis
ENSTNIG00000012014
N
l3mbtl1
Xenopus tropicalis
XB-GENE-949999
N
ENSXMAG00000019188
Xiphophorus maculatus
ENSXMAG00000019188
N