CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prox2
(
Takifugu rubripes
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSTRUG00000018353
T316566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.779
0.779
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.779
0.779
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.779
0.779
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000046962
Prospero
407
560
GLTPSHLKKAKLMFFYTRYPSSNVLKTYFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAIADGVSDVKDITVSRDSELFRALNMHYNKANDFHVPDRFLEVAEITLHEFYNAIADTKDSDPSWKKAIYKVICKLDSDVPEEFKTSSYFV
ENSTRUP00000046963
Prospero
527
679
GLTPSHLKKAKLMFFYTRYPSSNVLKTYFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAIADGVSDVKDITVSRDSELFRALNMHYNKANDFHVPDRFLEVAEITLHEFYNAIADTKDSDPSWKKAIYKVICKLDSDVPEEFKTSSYL
Links
Other
Prospero
family TFs
Other
Takifugu rubripes
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000007074
Ailuropoda melanoleuca
ENSAMEG00000007074
I
0.000
PATZ1
Bos taurus
ENSBTAG00000005478
I
0.000
PATZ1
Callithrix jacchus
ENSCJAG00000010978
N
0.000
PATZ1
Canis familiaris
ENSCAFG00000013087
I
0.000
PATZ1
Cavia porcellus
ENSCPOG00000010787
I
0.000
ENSCSAG00000008746
Chlorocebus sabaeus
ENSCSAG00000008746
N
0.000
PATZ1
Dasypus novemcinctus
ENSDNOG00000003183
I
0.000
PATZ1
Equus caballus
ENSECAG00000025030
N
0.000
PATZ1
Felis catus
ENSFCAG00000030253
N
0.000
PATZ1
Gorilla gorilla
ENSGGOG00000017171
I
0.000
PATZ1
Homo sapiens
ENSG00000100105
D
0.000
PATZ1
Microcebus murinus
ENSMICG00000005430
I
0.000
ENSMPUG00000012814
Mustela putorius furo
ENSMPUG00000012814
N
0.000
Patz1
Mus musculus
ENSMUSG00000020453
I
0.000
PATZ1
Myotis lucifugus
ENSMLUG00000009942
I
0.000