CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nAv.1.0.1.g04749
(
Acanthocheilonema viteae
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
nAv.1.0.1.g04749
T316768_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.873
0.873
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t04749-RA
Prospero
697
751
TLTPMHLRKAKLMFFYTRYPNSALLKSYFPDIRFNKNNTAQLVKWFSNFRFVANV
Links
Other
Prospero
family TFs
Other
Acanthocheilonema viteae
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB4
Felis catus
ENSFCAG00000029504
N
ENSGMOG00000007716
Gadus morhua
ENSGMOG00000007716
N
ENSMICG00000000950
Microcebus murinus
ENSMICG00000000950
N
ENSMODG00000006962
Monodelphis domestica
ENSMODG00000006962
N
ENSONIG00000009228
Oreochromis niloticus
ENSONIG00000009228
N
ENSTRUG00000012490
Takifugu rubripes
ENSTRUG00000012490
N
ENSTNIG00000001659
Tetraodon nigroviridis
ENSTNIG00000001659
N