CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Bos taurus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSBTAG00000015386
T317044_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.953
0.953
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.953
0.953
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.953
0.953
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.953
0.953
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.923
0.923
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000020447
Rel
8
176
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQILNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKDAVISRVRAGINPFNVPEQQLLDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Bos taurus
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCJAG00000014197
Callithrix jacchus
ENSCJAG00000014197
N
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
ENSCJAG00000007095
Callithrix jacchus
ENSCJAG00000007095
N
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N
HMGB1
Microcebus murinus
ENSMICG00000006213
N
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
HMGB1
Monodelphis domestica
ENSMODG00000004443
N
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
Myotis_brandtii_Hmgb1_10026956
Myotis brandtii
Myotis_brandtii_Hmgb1_10026956
N
Myotis_brandtii_Hmgb1_10003213
Myotis brandtii
Myotis_brandtii_Hmgb1_10003213
N
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
ENSOGAG00000028007
Otolemur garnettii
ENSOGAG00000028007
N
ENSOGAG00000029748
Otolemur garnettii
ENSOGAG00000029748
N
ENSOGAG00000032240
Otolemur garnettii
ENSOGAG00000032240
N
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
ENSOARG00000019147
Ovis aries
ENSOARG00000019147
N
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
AABR07025074.1
Rattus norvegicus
ENSRNOG00000032550
N
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
LOC108350839
Rattus norvegicus
ENSRNOG00000038437
N
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
ENSTSYG00000012587
Tarsius syrichta
ENSTSYG00000012587
N
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N