CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000002754
(
Ficedula albicollis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSFALG00000002754
T317149_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ENSGALG00000000671
M02442_2.00
Gallus gallus
NWTTTCCAYN
NRTGGAAAWN
PBM
Weirauch et al.(2014)
pTH9263
0.993
0.993
NFAT5
M03447_2.00
Homo sapiens
NDGTAMWTTTCCAY
RTGGAAAWKTACHN
SELEX
Jolma et al.(2013)
NFAT5_1
0.986
0.986
NFAT5
M05709_2.00
Homo sapiens
NGTANNWTTCCRY
RYGGAAWNNTACN
SELEX
Yin et al.(2017)
NFAT5_eDBD_HT-SELEX
0.986
0.986
NFAT5
M11224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT5_Q5_01
0.986
0.986
NFAT5
M11225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT5_Q5_02
0.986
0.986
NFAT5
M11226_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT5_Q5_03
0.986
0.986
NFAT5
M05710_2.00
Homo sapiens
NGTRNNTTTCCRY
RYGGAAANNYACN
SELEX
Yin et al.(2017)
NFAT5_eDBD_Methyl-HT-SELEX
0.986
0.986
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000002869
Rel
206
363
LKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCT
Links
Other
Rel
family TFs
Other
Ficedula albicollis
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_08728
Arthroderma otae
MCYG_08728
N
fgenesh1_pg.00042_#_107
Aspergillus carbonarius
fgenesh1_pg.00042_#_107
N
ACLA_018650
Aspergillus clavatus
CADACLAG00002402
N
CADAFLAG00001032
Aspergillus flavus
CADAFLAG00001032
N
CADANGAG00001005
Aspergillus niger
CADANGAG00001005
N
CADAORAG00002934
Aspergillus oryzae
CADAORAG00002934
N
EURHEDRAFT_512155
Aspergillus ruber
EURHEDRAFT_512155
N
PVAR5_2903
Byssochlamys spectabilis
PVAR5_2903
N
CIMG_02974
Coccidioides immitis
CIMG_02974
N
CPC735_000430
Coccidioides posadasii
CPC735_000430
N
MCYG_08728
Microsporum canis
MCYG_08728
N
MGYG_07260
Microsporum gypseum
MGYG_07260
N
Pc21g23510
Penicillium chrysogenum
Pc21g23510
N
PEX1_102890
Penicillium expansum
PEX1_102890
N
PMAA_075420
Penicillium marneffei
PMAA_075420
N
PDE_00052
Penicillium oxalicum
PDE_00052
N
PCH_Pc21g23510
Penicillium rubens
PCH_Pc21g23510
N
U727_0043066251
Penicillium solitum
U727_0043066251
N
PMAA_075420
Talaromyces marneffei
PMAA_075420
N
TSTA_095860
Talaromyces stipitatus
TSTA_095860
N
TEQG_05865
Trichophyton equinum
TEQG_05865
N
H101_02262
Trichophyton interdigitale
H101_02262
N
TESG_07217
Trichophyton tonsurans
TESG_07217
N
UREG_02941
Uncinocarpus reesii
UREG_02941
N