CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000002563
(
Gadus morhua
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSGMOG00000002563
T317203_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ENSGALG00000000671
M02442_2.00
Gallus gallus
NWTTTCCAYN
NRTGGAAAWN
PBM
Weirauch et al.(2014)
pTH9263
0.875
0.875
NFAT5
M03447_2.00
Homo sapiens
NDGTAMWTTTCCAY
RTGGAAAWKTACHN
SELEX
Jolma et al.(2013)
NFAT5_1
0.875
0.875
NFAT5
M05709_2.00
Homo sapiens
NGTANNWTTCCRY
RYGGAAWNNTACN
SELEX
Yin et al.(2017)
NFAT5_eDBD_HT-SELEX
0.875
0.875
NFAT5
M11224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT5_Q5_01
0.875
0.875
NFAT5
M11225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT5_Q5_02
0.875
0.875
NFAT5
M11226_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT5_Q5_03
0.875
0.875
NFAT5
M05710_2.00
Homo sapiens
NGTRNNTTTCCRY
RYGGAAANNYACN
SELEX
Yin et al.(2017)
NFAT5_eDBD_Methyl-HT-SELEX
0.875
0.875
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000002753
Rel
271
428
LKIIVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGVNEPVLLQVFVANDTGRVRPHGFYQACRVTGRNTTACKELDIEGTTVIEVPLDPGTSMTIAVDCVGILKLRNADVEARIGVAGSKKKSTRARLVFRVNVPGPDGSLLTLQTPSSPILCT
Links
Other
Rel
family TFs
Other
Gadus morhua
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF21449
Drosophila ananassae
FBgn0098450
N
GH24339
Drosophila grimshawi
FBgn0131795
N
GI10997
Drosophila mojavensis
FBgn0133760
N
GL20377
Drosophila persimilis
FBgn0157972
N
GA17691
Drosophila pseudoobscura
FBgn0077701
N
ac
Drosophila virilis
FBgn0013102
N