CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Rel
(
Drosophila melanogaster
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
FBgn0014018
T317602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rel
M03957_2.00
Drosophila melanogaster
NGGGGRTTCCCCB
VGGGGAAYCCCCN
SELEX
Nitta et al.(2015)
Rel_1
(Direct)
(Direct)
Rel
M03958_2.00
Drosophila melanogaster
GGGGGTTCCCCB
VGGGGAACCCCC
SELEX
Nitta et al.(2015)
Rel_2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0088375
Rel
152
335
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
FBpp0088971
Rel
152
335
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
FBpp0088972
Rel
40
223
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
FBpp0088973
Rel
152
335
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
Links
Other
Rel
family TFs
Other
Drosophila melanogaster
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF23487
Drosophila ananassae
FBgn0100481
N
GG10279
Drosophila erecta
FBgn0102588
N
GH10199
Drosophila grimshawi
FBgn0117680
N
GH24952
Drosophila grimshawi
FBgn0132407
N
Plzf
Drosophila melanogaster
FBgn0032401
N
GL14138
Drosophila persimilis
FBgn0151743
N
GM17399
Drosophila sechellia
FBgn0172309
N
GM26384
Drosophila sechellia
FBgn0181237
N
GD22137
Drosophila simulans
FBgn0193547
N
GE12479
Drosophila yakuba
FBgn0230222
N