CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RPRC001614
(
Rhodnius prolixus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
RPRC001614
T317691_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dl
M02712_2.00
Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS
SELEX
Mathelier et al.(2014)
MA0022.1
0.860
0.860
dl
M02713_2.00
Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC
SELEX
Mathelier et al.(2014)
MA0023.1
0.860
0.860
dl
M09691_2.00
Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV
Misc
Kulakovskiy et al.(2009)
dl
0.860
0.860
dl
M11243_2.00
Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC
Transfac
Matys et al.(2006)
I$DL_01
0.860
0.860
dl
M11244_2.00
Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV
Transfac
Matys et al.(2006)
I$DL_02
0.860
0.860
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RPRC001614-PA
Rel
49
91
IKIIEQPASKALRFRYECEGRSAGSIPGVNSTPENKTFPTIQG
Links
Other
Rel
family TFs
Other
Rhodnius prolixus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI005133
Acyrthosiphon pisum
ACYPI005133
I
0.884
REL1A
Aedes aegypti
AAEL007696
I
0.791
AARA011865
Anopheles arabiensis
AARA011865
I
0.767
AATE006484
Anopheles atroparvus
AATE006484
I
0.721
REL1
Anopheles gambiae
AGAP009515
I
0.767
AMIN001887
Anopheles minimus
AMIN001887
I
0.767
GB44031
Apis mellifera
GB44031
I
0.884
ACEP24572
Atta cephalotes
ACEP24572
I
0.860
e_gw.42.109.1
Branchiostoma floridae
e_gw.42.109.1
N
0.721
CpipJ_CPIJ002469
Culex pipiens
CpipJ_CPIJ002469
I
0.791
CPIJ002469
Culex quinquefasciatus
CPIJ002469
I
0.791
GF15103
Drosophila ananassae
FBgn0092128
I
0.860
GG21746
Drosophila erecta
FBgn0113924
I
0.860
dl
Drosophila melanogaster
FBgn0260632
D
0.860
GL18753
Drosophila persimilis
FBgn0156354
I
0.860
GA19765
Drosophila pseudoobscura
FBgn0079761
I
0.860
GM17128
Drosophila sechellia
FBgn0172039
I
0.860
dl
Drosophila simulans
FBgn0067500
I
0.860
GK10525
Drosophila willistoni
FBgn0212540
I
0.860
dl
Drosophila yakuba
FBgn0067431
I
0.860
LCUP010246
Lucilia cuprina
LCUP010246
I
0.860