Cmyd_10002066 (Chelonia mydas)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Cmyd_10002066 T317752_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.958 0.958
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.958 0.958
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.958 0.958
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.958 0.958
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.958 0.958
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.958 0.958
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.958 0.958
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.958 0.958
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.958 0.958
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.867 0.867
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.867 0.867
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.867 0.867
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.867 0.867
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.867 0.867
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.867 0.867
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.867 0.867
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.867 0.867
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.867 0.867
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.867 0.867
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.867 0.867
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.811 0.811
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.811 0.811
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.811 0.811
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.804 0.804
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.797 0.797
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.797 0.797
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.797 0.797
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.797 0.797
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.797 0.797
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.797 0.797
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.797 0.797
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.797 0.797
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.797 0.797
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.797 0.797
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.797 0.797
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.783 0.783
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.783 0.783
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.783 0.783
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.783 0.783
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.783 0.783
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.783 0.783
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.783 0.783
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.783 0.783
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.783 0.783
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.783 0.783
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.783 0.783
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.783 0.783
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.783 0.783
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.783 0.783
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.783 0.783
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10002066 Rel 45 204

Links

Other Rel family TFs
Other Chelonia mydas TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_004420 Acremonium chrysogenum ACRE_004420 I
AB00430.1 Alternaria brassicicola AB00430.1 I
MCYG_03654 Arthroderma otae MCYG_03654 I
fgenesh1_pm.00771_#_334 Aspergillus carbonarius fgenesh1_pm.00771_#_334 I
ACLA_014320 Aspergillus clavatus CADACLAG00001095 I
CADAFLAG00007123 Aspergillus flavus CADAFLAG00007123 I
AFUA_5G11260 Aspergillus fumigatus CADAFUAG00006672 I
ANIA_00176 Aspergillus nidulans CADANIAG00002559 I
CADANGAG00000234 Aspergillus niger CADANGAG00000234 I
CADAORAG00008720 Aspergillus oryzae CADAORAG00008720 I
EURHEDRAFT_378605 Aspergillus ruber EURHEDRAFT_378605 I
ATEG_07714 Aspergillus terreus CADATEAG00002169 I
M438DRAFT_316726 Aureobasidium pullulans M438DRAFT_316726 I
AUEXF2481DRAFT_650620 Aureobasidium subglaciale AUEXF2481DRAFT_650620 I
BAUCODRAFT_52987 Baudoinia compniacensis BAUCODRAFT_52987 I
BBA_01720 Beauveria bassiana BBA_01720 I
COCC4DRAFT_135674 Bipolaris maydis COCC4DRAFT_135674 I
COCMIDRAFT_39011 Bipolaris oryzae COCMIDRAFT_39011 I
COCSADRAFT_216437 Bipolaris sorokiniana COCSADRAFT_216437 I
COCVIDRAFT_97406 Bipolaris victoriae COCVIDRAFT_97406 I
COCCADRAFT_83536 Bipolaris zeicola COCCADRAFT_83536 I
BDDG_05274 Blastomyces dermatitidis BDDG_05274 I
Bcin12g04210 Botrytis cinerea Bcin12g04210 I
PVAR5_6896 Byssochlamys spectabilis PVAR5_6896 I
CANTEDRAFT_91703 Candida tenuis CANTEDRAFT_91703 I
A1O1_02921 Capronia coronata A1O1_02921 I
A1O3_05114 Capronia epimyces A1O3_05114 I
PV04_09257 Capronia semiimmersa PV04_09257 I
CTHT_0034490 Chaetomium thermophilum CTHT_0034490 I
Z519_11836 Cladophialophora bantiana Z519_11836 I
G647_07655 Cladophialophora carrionii G647_07655 I
PV07_00560 Cladophialophora immunda PV07_00560 I
A1O5_01432 Cladophialophora psammophila A1O5_01432 I
A1O7_08680 Cladophialophora yegresii A1O7_08680 I
CPUR_05830 Claviceps purpurea CPUR_05830 I
estExt_Genewise1Plus.C_150287 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_150287 I
CFIO01_05363 Colletotrichum fioriniae CFIO01_05363 I
GLRG_02856 Colletotrichum graminicola GLRG_02856 I
CH063_08000 Colletotrichum higginsianum CH063_08000 I
Cob_10609 Colletotrichum orbiculare Cob_10609 I
CSUB01_07382 Colletotrichum sublineola CSUB01_07382 I
W97_00099 Coniosporium apollinis W97_00099 I
CCM_04145 Cordyceps militaris CCM_04145 I
e_gw1.3.1522.1 Cryphonectria parasitica e_gw1.3.1522.1 I
HMPREF1541_04069 Cyphellophora europaea HMPREF1541_04069 I
DOTSEDRAFT_106841 Dothistroma septosporum DOTSEDRAFT_106841 I
EPUS_06161 Endocarpon pusillum EPUS_06161 I
EV44_g2538 Erysiphe necator EV44_g2538 I
A1O9_08083 Exophiala aquamarina A1O9_08083 I
HMPREF1120_00896 Exophiala dermatitidis HMPREF1120_00896 I
PV10_05152 Exophiala mesophila PV10_05152 I
PV06_07461 Exophiala oligosperma PV06_07461 I
PV11_03095 Exophiala sideris PV11_03095 I
PV08_09234 Exophiala spinifera PV08_09234 I
PV05_00540 Exophiala xenobiotica PV05_00540 I
Z517_01439 Fonsecaea pedrosoi Z517_01439 I
FFUJ_04434 Fusarium fujikuroi FFUJ_04434 I
FGRRES_09565 Fusarium graminearum FGRRES_09565 I
FOXG_06266 Fusarium oxysporum FOXG_06266 I
FPSE_00936 Fusarium pseudograminearum FPSE_00936 I
NechaG32931 Fusarium solani NechaG32931 I
FVEG_04118 Fusarium verticillioides FVEG_04118 I
GGTG_08766 Gaeumannomyces graminis GGTG_08766 I
CMQ_2849 Grosmannia clavigera CMQ_2849 I
HCBG_04861 Histoplasma capsulatum HCBG_04861 I
LEMA_P033710.1 Leptosphaeria maculans LEMA_P033710.1 I
MPH_09366 Macrophomina phaseolina MPH_09366 I
MGG_01840 Magnaporthe oryzae MGG_01840 I
MAPG_05020 Magnaporthe poae MAPG_05020 I
MAM_04386 Metarhizium album MAM_04386 I
MANI_004770 Metarhizium anisopliae MANI_004770 I
MBR_02066 Metarhizium brunneum MBR_02066 I
MGU_07352 Metarhizium guizhouense MGU_07352 I
MAJ_05645 Metarhizium majus MAJ_05645 I
X797_005876 Metarhizium robertsii X797_005876 I
MCYG_03654 Microsporum canis MCYG_03654 I
MGYG_03243 Microsporum gypseum MGYG_03243 I
gw1.3.1964.1 Mucor circinelloides gw1.3.1964.1 I
MYCTH_2298578 Myceliophthora thermophila MYCTH_2298578 I
estExt_fgenesh1_pg.C_chr_90446 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_90446 I
e_gw1.18.217.1 Nectria haematococca e_gw1.18.217.1 I
NFIA_076010 Neosartorya fischeri CADNFIAG00006910 I
sre Neurospora crassa NCU07728 D
estExt_Genewise1.C_31450 Neurospora discreta estExt_Genewise1.C_31450 I
NEUTE1DRAFT_59972 Neurospora tetrasperma NEUTE1DRAFT_59972 I
OCS_04920 Ophiocordyceps sinensis OCS_04920 I
PABG_04857 Paracoccidioides brasiliensis PABG_04857 I
PAAG_02358 Paracoccidioides sp lutzii PAAG_02358 I
Pc21g05640 Penicillium chrysogenum Pc21g05640 I
PDIP_60900 Penicillium digitatum PDIP_60900 I
PEX1_086910 Penicillium expansum PEX1_086910 I
PITC_054800 Penicillium italicum PITC_054800 I
PMAA_032870 Penicillium marneffei PMAA_032870 I
PCH_Pc21g05640 Penicillium rubens PCH_Pc21g05640 I
U727_00431140131 Penicillium solitum U727_00431140131 I
PFICI_05672 Pestalotiopsis fici PFICI_05672 I
SNOG_14013 Phaeosphaeria nodorum SNOG_14013 I
estExt_fgeneshPB_pg.C_40297 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_40297 I
PODANS_6_1720 Podospora anserina PODANS_6_1720 I
MYCFIDRAFT_216796 Pseudocercospora fijiensis MYCFIDRAFT_216796 I
GMDG_03864 Pseudogymnoascus destructans GMDG_03864 I
V499_07163 Pseudogymnoascus pannorum V499_07163 I
PTT_10383 Pyrenophora teres PTT_10383 I
PTRG_09160 Pyrenophora triticirepentis PTRG_09160 I
Z518_02954 Rhinocladiella mackenziei Z518_02954 I
RO3G_05554 Rhizopus oryzae RO3G_05554 I
RO3G_14663 Rhizopus oryzae RO3G_14663 I
SAPIO_CDS7310 Scedosporium apiospermum SAPIO_CDS7310 I
SBOR_4222 Sclerotinia borealis SBOR_4222 I
SS1G_08523 Sclerotinia sclerotiorum SS1G_08523 I
SETTUDRAFT_109283 Setosphaeria turcica SETTUDRAFT_109283 I
SMAC_04791 Sordaria macrospora SMAC_04791 I
SEPMUDRAFT_72436 Sphaerulina musiva SEPMUDRAFT_72436 I
SPBR_06845 Sporothrix brasiliensis SPBR_06845 I
HMPREF1624_06960 Sporothrix schenckii HMPREF1624_06960 I
S40288_06641 Stachybotrys chartarum S40288_06641 I
S40285_06937 Stachybotrys chlorohalonata S40285_06937 I
SNOG_14013 Stagonospora nodorum SNOG_14013 I
PMAA_032870 Talaromyces marneffei PMAA_032870 I
TSTA_064620 Talaromyces stipitatus TSTA_064620 I
THITE_2114956 Thielavia terrestris THITE_2114956 I
VHEMI03353 Torrubiella hemipterigena VHEMI03353 I
TRIATDRAFT_174504 Trichoderma atroviride TRIATDRAFT_174504 I
TRIREDRAFT_4231 Trichoderma reesei TRIREDRAFT_4231 I
TRIVIDRAFT_192933 Trichoderma virens TRIVIDRAFT_192933 I
TEQG_01355 Trichophyton equinum TEQG_01355 I
H101_03359 Trichophyton interdigitale H101_03359 I
H102_03743 Trichophyton rubrum H102_03743 I
H105_03770 Trichophyton soudanense H105_03770 I
TESG_05506 Trichophyton tonsurans TESG_05506 I
UV8b_5933 Ustilaginoidea virens UV8b_5933 I
PV09_06780 Verruconis gallopava PV09_06780 I
VDBG_00739 Verticillium albo atrum VDBG_00739 I
VDBG_00739 Verticillium alfalfae VDBG_00739 I
VDAG_00352 Verticillium dahliae VDAG_00352 I
Mycgr3G110870 Zymoseptoria tritici Mycgr3G110870 I