Gfo_R008165 (Geospiza fortis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Gfo_R008165 T317786_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rel
M09353_2.00 		Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA		 Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A 		0.805 0.805
REL
M02710_2.00 		Homo sapiens
BGGRNWTTCC
GGAAWNYCCV		 SELEX
Mathelier et al.(2014)
MA0101.1 		0.799 0.799
REL
M09350_2.00 		Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA		 Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B 		0.799 0.799
REL
M11235_2.00 		Homo sapiens
BGGRNWTTCC
GGAAWNYCCV		 Transfac
Matys et al.(2006)
V$CREL_01 		0.799 0.799
REL
M11236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREL_Q6 		0.799 0.799
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R008165 Rel 7 175

Links

Other Rel family TFs
Other Geospiza fortis TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_057790 Acremonium chrysogenum ACRE_057790 N
AOL_s00043g47 Arthrobotrys oligospora AOL_s00043g47 N
ARB_06070 Arthroderma benhamiae ARB_06070 N
AGOS_AFL085C Ashbya gossypii AGOS_AFL085C I
AGOS_AFR136C Ashbya gossypii AGOS_AFR136C I
fgenesh1_pg.00795_#_26 Aspergillus carbonarius fgenesh1_pg.00795_#_26 N
CADAFLAG00013433 Aspergillus flavus CADAFLAG00013433 N
AFUA_4G04502 Aspergillus fumigatus CADAFUAG00001430 N
CADANGAG00010969 Aspergillus niger CADANGAG00010969 N
CADAORAG00012206 Aspergillus oryzae CADAORAG00012206 N
EURHEDRAFT_462177 Aspergillus ruber EURHEDRAFT_462177 N
ATEG_02742 Aspergillus terreus CADATEAG00003788 N
M437DRAFT_56721 Aureobasidium melanogenum M437DRAFT_56721 N
M438DRAFT_272047 Aureobasidium pullulans M438DRAFT_272047 N
AUEXF2481DRAFT_4075 Aureobasidium subglaciale AUEXF2481DRAFT_4075 N
BAUCODRAFT_151200 Baudoinia compniacensis BAUCODRAFT_151200 N
BBA_04216 Beauveria bassiana BBA_04216 N
COCC4DRAFT_137933 Bipolaris maydis COCC4DRAFT_137933 N
COCMIDRAFT_90826 Bipolaris oryzae COCMIDRAFT_90826 N
COCSADRAFT_237465 Bipolaris sorokiniana COCSADRAFT_237465 N
COCVIDRAFT_100540 Bipolaris victoriae COCVIDRAFT_100540 N
COCCADRAFT_23204 Bipolaris zeicola COCCADRAFT_23204 N
BDDG_07871 Blastomyces dermatitidis BDDG_07871 N
BGHDH14_bgh06000 Blumeria graminis BGHDH14_bgh06000 N
Bcin02g02960 Botrytis cinerea Bcin02g02960 N
PVAR5_3532 Byssochlamys spectabilis PVAR5_3532 N
CD36_31370 Candida dubliniensis CD36_31370 N
CAGL0I07183g Candida glabrata CAGL0I07183g I
PGUG_04779 Candida guilliermondii PGUG_04779 I
CLUG_03610 Candida lusitaniae CLUG_03610 I
G210_0510 Candida maltosa G210_0510 I
CPAG_04153 Candida parapsilosis CPAG_04153 N
CANTEDRAFT_132848 Candida tenuis CANTEDRAFT_132848 I
CTRG_00655 Candida tropicalis CTRG_00655 I
A1O1_04043 Capronia coronata A1O1_04043 N
A1O3_01459 Capronia epimyces A1O3_01459 N
PV04_05986 Capronia semiimmersa PV04_05986 N
CTHT_0005400 Chaetomium thermophilum CTHT_0005400 N
Z519_07578 Cladophialophora bantiana Z519_07578 N
G647_06910 Cladophialophora carrionii G647_06910 I
PV07_04143 Cladophialophora immunda PV07_04143 N
A1O5_07765 Cladophialophora psammophila A1O5_07765 N
A1O7_05617 Cladophialophora yegresii A1O7_05617 N
CPUR_00409 Claviceps purpurea CPUR_00409 N
CLUG_03610 Clavispora lusitaniae CLUG_03610 I
CIMG_08549 Coccidioides immitis CIMG_08549 N
CPC735_062070 Coccidioides posadasii CPC735_062070 N
estExt_Genewise1Plus.C_50691 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50691 N
CFIO01_04547 Colletotrichum fioriniae CFIO01_04547 N
CGGC5_1651 Colletotrichum gloeosporioides CGGC5_1651 N
GLRG_05271 Colletotrichum graminicola GLRG_05271 N
CH063_04335 Colletotrichum higginsianum CH063_04335 N
Cob_03924 Colletotrichum orbiculare Cob_03924 N
CSUB01_10826 Colletotrichum sublineola CSUB01_10826 N
W97_04615 Coniosporium apollinis W97_04615 N
estExt_Genewise1Plus.C_21911 Cryphonectria parasitica estExt_Genewise1Plus.C_21911 N
HMPREF1541_00864 Cyphellophora europaea HMPREF1541_00864 N
H072_3239 Dactylellina haptotyla H072_3239 N
DEHA2G10560g Debaryomyces hansenii DEHA2G10560g I
DOTSEDRAFT_73714 Dothistroma septosporum DOTSEDRAFT_73714 N
DRE_06964 Drechslerella stenobrocha DRE_06964 I
EPUS_01915 Endocarpon pusillum EPUS_01915 N
Ecym_2312 Eremothecium cymbalariae Ecym_2312 I
EV44_g0556 Erysiphe necator EV44_g0556 N
UCREL1_4627 Eutypa lata UCREL1_4627 N
A1O9_03914 Exophiala aquamarina A1O9_03914 N
HMPREF1120_08552 Exophiala dermatitidis HMPREF1120_08552 N
PV10_07698 Exophiala mesophila PV10_07698 N
PV06_00857 Exophiala oligosperma PV06_00857 N
PV11_00595 Exophiala sideris PV11_00595 N
PV08_00880 Exophiala spinifera PV08_00880 N
PV05_05603 Exophiala xenobiotica PV05_05603 N
Z517_00530 Fonsecaea pedrosoi Z517_00530 N
FFUJ_08331 Fusarium fujikuroi FFUJ_08331 N
FGRRES_10868 Fusarium graminearum FGRRES_10868 N
FOXG_12803 Fusarium oxysporum FOXG_12803 N
FPSE_09836 Fusarium pseudograminearum FPSE_09836 N
NechaG40194 Fusarium solani NechaG40194 N
FVEG_11544 Fusarium verticillioides FVEG_11544 N
GGTG_10719 Gaeumannomyces graminis GGTG_10719 N
M7I_3486 Glarea lozoyensis M7I_3486 N
CMQ_3588 Grosmannia clavigera CMQ_3588 N
HCBG_08291 Histoplasma capsulatum HCBG_08291 N
KNAG_0K00470 Kazachstania naganishii KNAG_0K00470 N
KLLA0_E03191g Kluyveromyces lactis KLLA0_E03191g I
KLTH0F14982g Kluyveromyces thermotolerans KLTH0F14982g I
Kwal_21254 Kluyveromyces waltii Kwal_21254 I
Kwal_24036 Kluyveromyces waltii Kwal_24036 I
PAS_chr2-1_0026 Komagataella pastoris PAS_chr2-1_0026 I
KUCA_T00005449001 Kuraishia capsulata KUCA_T00005449001 I
SAKL0G03586g Lachancea kluyveri SAKL0G03586g I
KLTH0F14982g Lachancea thermotolerans KLTH0F14982g I
LEMA_P076740.1 Leptosphaeria maculans LEMA_P076740.1 N
LELG_03188 Lodderomyces elongisporus LELG_03188 N
MPH_02552 Macrophomina phaseolina MPH_02552 N
MGG_06971 Magnaporthe oryzae MGG_06971 N
MAPG_00013 Magnaporthe poae MAPG_00013 N
MBM_05529 Marssonina brunnea MBM_05529 N
MAM_02919 Metarhizium album MAM_02919 N
MANI_027126 Metarhizium anisopliae MANI_027126 N
MBR_04590 Metarhizium brunneum MBR_04590 N
MGU_04157 Metarhizium guizhouense MGU_04157 N
MAJ_01594 Metarhizium majus MAJ_01594 N
X797_007282 Metarhizium robertsii X797_007282 N
PGUG_04779 Meyerozyma guilliermondii PGUG_04779 I
MCYG_02334 Microsporum canis MCYG_02334 N
MGYG_07335 Microsporum gypseum MGYG_07335 N
GNLVRS01_PISO0E07748g Millerozyma farinosa GNLVRS01_PISO0E07748g I
GNLVRS01_PISO0F09091g Millerozyma farinosa GNLVRS01_PISO0F09091g I
E5Q_05471 Mixia osmundae E5Q_05471 I
MYCTH_2312138 Myceliophthora thermophila MYCTH_2312138 N
gw1.18.319.1 Mycosphaerella fijiensis gw1.18.319.1 N
e_gw1.3.1300.1 Mycosphaerella graminicola e_gw1.3.1300.1 N
NCAS_0H02280 Naumovozyma castellii NCAS_0H02280 I
NDAI_0C01380 Naumovozyma dairenensis NDAI_0C01380 I
e_gw1.12.536.1 Nectria haematococca e_gw1.12.536.1 N
NFIA_028860 Neosartorya fischeri CADNFIAG00002767 N
hsf-2 Neurospora crassa NCU08480 N
estExt_fgenesh2_pg.C_100130 Neurospora discreta estExt_fgenesh2_pg.C_100130 N
HPODL_00954 Ogataea parapolymorpha HPODL_00954 I
OIDMADRAFT_181379 Oidiodendron maius OIDMADRAFT_181379 N
OCS_04575 Ophiocordyceps sinensis OCS_04575 N
PABG_01939 Paracoccidioides brasiliensis PABG_01939 N
PAAG_01459 Paracoccidioides sp lutzii PAAG_01459 N
Pc13g06670 Penicillium chrysogenum Pc13g06670 N
PDIP_15740 Penicillium digitatum PDIP_15740 N
PEX1_020890 Penicillium expansum PEX1_020890 N
PMAA_085950 Penicillium marneffei PMAA_085950 N
PDE_05764 Penicillium oxalicum PDE_05764 N
PCH_Pc13g06670 Penicillium rubens PCH_Pc13g06670 N
U727_0043017041 Penicillium solitum U727_0043017041 N
PFICI_09422 Pestalotiopsis fici PFICI_09422 I
SNOG_08309 Phaeosphaeria nodorum SNOG_08309 I
fgeneshPB_pg.46__69 Phycomyces blakesleeanus fgeneshPB_pg.46__69 I
XP_002490906.1 Pichia pastoris XP_002490906.1 I
estExt_fgenesh1_pg.C_chr_6.10474 Pichia stipitis estExt_fgenesh1_pg.C_chr_6.10474 I
PODANS_3_7650 Podospora anserina PODANS_3_7650 N
MYCFIDRAFT_146678 Pseudocercospora fijiensis MYCFIDRAFT_146678 N
GMDG_00035 Pseudogymnoascus destructans GMDG_00035 N
V499_07683 Pseudogymnoascus pannorum V499_07683 N
PGTG_02256 Puccinia graminis PGTG_02256 I
PTT_06554 Pyrenophora teres PTT_06554 N
PTRG_08428 Pyrenophora triticirepentis PTRG_08428 N
Z518_08730 Rhinocladiella mackenziei Z518_08730 N
Scas_Contig714.29 Saccharomyces castellii Scas_Contig714.29 I
AACERI_AaceriAFL085C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL085C I
AACERI_AaceriAFR136C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR136C I
SAPIO_CDS6017 Scedosporium apiospermum SAPIO_CDS6017 N
PICST_68146 Scheffersomyces stipitis PICST_68146 I
SPOG_01941 Schizosaccharomyces cryophilus SPOG_01941 I
SJAG_04388 Schizosaccharomyces japonicus SJAG_04388 I
SOCG_00564 Schizosaccharomyces octosporus SOCG_00564 I
hsf1 Schizosaccharomyces pombe SPAC2E12.02 I
SBOR_3380 Sclerotinia borealis SBOR_3380 N
SS1G_01646 Sclerotinia sclerotiorum SS1G_01646 N
SETTUDRAFT_34274 Setosphaeria turcica SETTUDRAFT_34274 N
SMAC_00003 Sordaria macrospora SMAC_00003 N
SEPMUDRAFT_47596 Sphaerulina musiva SEPMUDRAFT_47596 N
SPPG_01116 Spizellomyces punctatus SPPG_01116 I
estExt_fgenesh1_pg.C_30124 Sporobolomyces roseus estExt_fgenesh1_pg.C_30124 I
SPBR_01490 Sporothrix brasiliensis SPBR_01490 N
HMPREF1624_03486 Sporothrix schenckii HMPREF1624_03486 N
S40288_00568 Stachybotrys chartarum S40288_00568 N
S40285_02996 Stachybotrys chlorohalonata S40285_02996 N
SNOG_08309 Stagonospora nodorum SNOG_08309 N
PMAA_085950 Talaromyces marneffei PMAA_085950 N
TSTA_121070 Talaromyces stipitatus TSTA_121070 N
TBLA_0A02000 Tetrapisispora blattae TBLA_0A02000 I
THITE_2123849 Thielavia terrestris THITE_2123849 N
UCRPA7_905 Togninia minima UCRPA7_905 N
VHEMI09490 Torrubiella hemipterigena VHEMI09490 N
TDEL_0A03400 Torulaspora delbrueckii TDEL_0A03400 I
TRIATDRAFT_174226 Trichoderma atroviride TRIATDRAFT_174226 N
TRIREDRAFT_27357 Trichoderma reesei TRIREDRAFT_27357 N
TRIVIDRAFT_125026 Trichoderma virens TRIVIDRAFT_125026 N
TEQG_06289 Trichophyton equinum TEQG_06289 N
H101_00214 Trichophyton interdigitale H101_00214 N
TESG_06359 Trichophyton tonsurans TESG_06359 N
TRV_00290 Trichophyton verrucosum TRV_00290 N
GSTUM_00004466001 Tuber melanosporum GSTUM_00004466001 N
UREG_02611 Uncinocarpus reesii UREG_02611 N
UV8b_4500 Ustilaginoidea virens UV8b_4500 N
PV09_01119 Verruconis gallopava PV09_01119 N
VDBG_05547 Verticillium albo atrum VDBG_05547 N
VDBG_05547 Verticillium alfalfae VDBG_05547 N
VDAG_07492 Verticillium dahliae VDAG_07492 N
BN7_3380 Wickerhamomyces ciferrii BN7_3380 I
YALI0_D04785g Yarrowia lipolytica YALI0_D04785g I
ZBAI_09477 Zygosaccharomyces bailii ZBAI_09477 I
ZYRO0D11286g Zygosaccharomyces rouxii ZYRO0D11286g I
Mycgr3G38379 Zymoseptoria tritici Mycgr3G38379 N