CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LCUP010246
(
Lucilia cuprina
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
LCUP010246
T317847_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dl
M02712_2.00
Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS
SELEX
Mathelier et al.(2014)
MA0022.1
0.970
0.970
dl
M02713_2.00
Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC
SELEX
Mathelier et al.(2014)
MA0023.1
0.970
0.970
dl
M09691_2.00
Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV
Misc
Kulakovskiy et al.(2009)
dl
0.970
0.970
dl
M11243_2.00
Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC
Transfac
Matys et al.(2006)
I$DL_01
0.970
0.970
dl
M11244_2.00
Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV
Transfac
Matys et al.(2006)
I$DL_02
0.970
0.970
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP010246-PA
Rel
70
240
VKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDQPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFAHRFQPSSIDLNSVRLCFQVFMESDQKGRFTQPLPPVVSEPIYDK
Links
Other
Rel
family TFs
Other
Lucilia cuprina
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g11917
Steinernema carpocapsae
L596_g11917
N
L596_g12950
Steinernema carpocapsae
L596_g12950
N
L596_g17654
Steinernema carpocapsae
L596_g17654
N
L596_g9728
Steinernema carpocapsae
L596_g9728
N
L892_g13874
Steinernema scapterisci
L892_g13874
N