CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC008474
(
Leptinotarsa decemlineata
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
LDEC008474
T317851_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dl
M02712_2.00
Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS
SELEX
Mathelier et al.(2014)
MA0022.1
0.781
0.781
dl
M02713_2.00
Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC
SELEX
Mathelier et al.(2014)
MA0023.1
0.781
0.781
dl
M09691_2.00
Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV
Misc
Kulakovskiy et al.(2009)
dl
0.781
0.781
dl
M11243_2.00
Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC
Transfac
Matys et al.(2006)
I$DL_01
0.781
0.781
dl
M11244_2.00
Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV
Transfac
Matys et al.(2006)
I$DL_02
0.781
0.781
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC008474-PA
Rel
76
246
IKIVEQPAPKALRFRYECEGRSAGSIPGTNSTPENKTYPTIQIVGYQGKAVVVVSCVTKDNPHKPHPHNLVGREGCRRGVCTLEIPVDTMTVQFSNLGIQCVKKKEIENALRTREEIRVDPFRTGFAHRNQPTSIDLNTVRLCFQVFLEGDTPGKFTVPLKPVVSEPIYDK
Links
Other
Rel
family TFs
Other
Leptinotarsa decemlineata
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI005133
Acyrthosiphon pisum
ACYPI005133
I
0.740
REL1A
Aedes aegypti
AAEL007696
I
0.722
AARA011865
Anopheles arabiensis
AARA011865
I
0.728
AATE006484
Anopheles atroparvus
AATE006484
I
0.728
ACHR009253
Anopheles christyi
ACHR009253
I
0.716
ACOM032427
Anopheles coluzzii
ACOM032427
I
0.728
ACUA016711
Anopheles culicifacies
ACUA016711
I
0.710
ADIR006013
Anopheles dirus
ADIR006013
I
0.722
AEPI001360
Anopheles epiroticus
AEPI001360
I
0.722
AFAF001010
Anopheles farauti
AFAF001010
I
0.716
AFUN005302
Anopheles funestus
AFUN005302
I
0.716
REL1
Anopheles gambiae
AGAP009515
I
0.728
AMEC000206
Anopheles melas
AMEC000206
I
0.728
AMEM007632
Anopheles merus
AMEM007632
I
0.728
AMIN001887
Anopheles minimus
AMIN001887
I
0.734
AQUA005813
Anopheles quadriannulatus
AQUA005813
I
0.728
ASTEI03826
Anopheles stephensi
ASTEI03826
I
0.716
GB44031
Apis mellifera
GB44031
I
0.757
ACEP24572
Atta cephalotes
ACEP24572
I
0.757
Cflo_08314--NP_001011577.1_APIME
Camponotus floridanus
Cflo_08314--NP_001011577.1_APIME
I
0.740
CLEC006384
Cimex lectularius
CLEC006384
I
0.775
CpipJ_CPIJ002469
Culex pipiens
CpipJ_CPIJ002469
I
0.716
CPIJ002469
Culex quinquefasciatus
CPIJ002469
I
0.716
KGM_12899
Danaus plexippus
KGM_12899
I
0.722
DAPPUDRAFT_52849
Daphnia pulex
DAPPUDRAFT_52849
I
0.775
GF15103
Drosophila ananassae
FBgn0092128
I
0.787
GG21746
Drosophila erecta
FBgn0113924
I
0.781
GH10077
Drosophila grimshawi
FBgn0117558
I
0.781
dl
Drosophila melanogaster
FBgn0260632
D
0.781
GI16541
Drosophila mojavensis
FBgn0139289
I
0.781
GL18753
Drosophila persimilis
FBgn0156354
I
0.781
GA19765
Drosophila pseudoobscura
FBgn0079761
I
0.781
GM17128
Drosophila sechellia
FBgn0172039
I
0.781
dl
Drosophila simulans
FBgn0067500
I
0.781
GJ16232
Drosophila virilis
FBgn0203417
I
0.781
GK10525
Drosophila willistoni
FBgn0212540
I
0.781
dl
Drosophila yakuba
FBgn0067431
I
0.781
Hsal_01917--NP_001011577.1_APIME
Harpegnathos saltator
Hsal_01917--NP_001011577.1_APIME
I
0.751
LCUP010246
Lucilia cuprina
LCUP010246
I
0.799
MDOA008285
Musca domestica
MDOA008285
I
0.793
PHUM534140
Pediculus humanus
PHUM534140
I
0.763
PPAI001149
Phlebotomus papatasi
PPAI001149
I
0.734
SINV14836
Solenopsis invicta
SINV14836
I
0.734
tetur11g04270
Tetranychus urticae
tetur11g04270
I
0.722
TC007697
Tribolium castaneum
TC007697
I
0.817
L798_11048
Zootermopsis nevadensis
L798_11048
I
0.775