ENSETEG00000007550 (Echinops telfairi)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 ENSETEG00000007550 T318229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx4
M00186_2.00 		Mus musculus
GTHDYYNNSN
NSNNRRHDAC		 PBM
Badis et al.(2009)
Rfx4_3761 		0.690 0.536
RFX4
M03456_2.00 		Homo sapiens
NGTWRYCATRGHWACN
NGTWDCYATGRYWACN		 SELEX
Jolma et al.(2013)
RFX4_1 		0.690 0.536
RFX4
M03457_2.00 		Homo sapiens
NGTTGCYRRGCAACS
SGTTGCYYRGCAACN		 SELEX
Jolma et al.(2013)
RFX4_2 		0.690 0.536
RFX4
M05721_2.00 		Homo sapiens
BGTWRYCATGRYWACV
BGTWRYCATGRYWACV		 SELEX
Yin et al.(2017)
RFX4_eDBD_HT-SELEX 		0.690 0.536
RFX4
M05722_2.00 		Homo sapiens
BGTWRYCATGRYWACV
BGTWRYCATGRYWACV		 SELEX
Yin et al.(2017)
RFX4_eDBD_Methyl-HT-SELEX 		0.690 0.536
RFX4
M02448_2.00 		Cavia porcellus
GTHDYYNNGN
NCNNRRHDAC		 PBM
Weirauch et al.(2014)
pTH9249 		0.690 0.522
Rfx6
M09365_2.00 		Mus musculus
BDGTWKCYNDG
CHNRGMAACHV		 Misc
Kulakovskiy et al.(2013)
RFX6_MOUSE.H11MO.0.C 		0.660 0.348
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000006137 RFX 58 136

Links

Other RFX family TFs
Other Echinops telfairi TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005843 Ailuropoda melanoleuca ENSAMEG00000005843 I 0.662
ENSAMEG00000016059 Ailuropoda melanoleuca ENSAMEG00000016059 I 0.690
Alligator_sinensis_CCG009361.1 Alligator sinensis Alligator_sinensis_CCG009361.1 I 0.670
ENSAPLG00000002929 Anas platyrhynchos ENSAPLG00000002929 I 0.662
ENSAPLG00000005849 Anas platyrhynchos ENSAPLG00000005849 I 0.690
ASIM_0001365201 Anisakis simplex ASIM_0001365201 I 0.664
RFX6 Anolis carolinensis ENSACAG00000014185 I 0.662
RFX4 Anolis carolinensis ENSACAG00000015355 I 0.690
Afo_R005589 Aptenodytes forsteri Afo_R005589 I 0.653
Afo_R011060 Aptenodytes forsteri Afo_R011060 I 0.690
ENSAMXG00000017899 Astyanax mexicanus ENSAMXG00000017899 I 0.661
ENSAMXG00000020148 Astyanax mexicanus ENSAMXG00000020148 I 0.688
ENSBTAP00000000169-D1 Bos grunniens ENSBTAP00000000169-D1 I 0.690
ENSBTAP00000000329-D1 Bos grunniens ENSBTAP00000000329-D1 I 0.662
RFX6 Bos taurus ENSBTAG00000000264 I 0.662
fgenesh2_pg.scaffold_117000002 Branchiostoma floridae fgenesh2_pg.scaffold_117000002 I 0.668
Brh_R002885 Buceros rhinoceros Brh_R002885 I 0.690
Brh_R008084 Buceros rhinoceros Brh_R008084 I 0.653
RFX6 Callithrix jacchus ENSCJAG00000004349 I 0.662
Aan_R008662 Calypte anna Aan_R008662 I 0.690
Aan_R009636 Calypte anna Aan_R009636 I 0.662
RFX6 Canis familiaris ENSCAFG00000000915 I 0.662
RFX4 Canis familiaris ENSCAFG00000001813 I 0.690
CapteG108705 Capitella teleta CapteG108705 I 0.651
CapteG183181 Capitella teleta CapteG183181 I 0.685
RFX4 Cavia porcellus ENSCPOG00000001750 D 0.690
RFX6 Cavia porcellus ENSCPOG00000015023 I 0.656
ENSCSAG00000002952 Chlorocebus sabaeus ENSCSAG00000002952 I 0.690
ENSCSAG00000015856 Chlorocebus sabaeus ENSCSAG00000015856 I 0.662
CGI_10006760 Crassostrea gigas CGI_10006760 I 0.661
CGI_10018775 Crassostrea gigas CGI_10018775 I 0.680
rfx4 Danio rerio ENSDARG00000026395 I 0.689
rfx6 Danio rerio ENSDARG00000041702 I 0.660
DAPPUDRAFT_42744 Daphnia pulex DAPPUDRAFT_42744 I 0.673
RFX6 Dasypus novemcinctus ENSDNOG00000019162 I 0.662
Rfx4 Dipodomys ordii ENSDORG00000003959 I 0.688
Rfx6 Dipodomys ordii ENSDORG00000013591 I 0.662
RFX6 Echinops telfairi ENSETEG00000005677 I 0.667
RFX4 Equus caballus ENSECAG00000005111 I 0.690
RFX6 Equus caballus ENSECAG00000019804 I 0.663
RFX6 Erinaceus europaeus ENSEEUG00000001945 I 0.662
D915_00243 Fasciola hepatica D915_00243 I 0.652
RFX4 Felis catus ENSFCAG00000015618 I 0.690
RFX6 Felis catus ENSFCAG00000018903 I 0.662
ENSFALG00000011057 Ficedula albicollis ENSFALG00000011057 I 0.662
ENSFALG00000013407 Ficedula albicollis ENSFALG00000013407 I 0.690
ENSGMOG00000004267 Gadus morhua ENSGMOG00000004267 I 0.690
ENSGMOG00000018155 Gadus morhua ENSGMOG00000018155 I 0.657
RFX4 Gallus gallus ENSGALG00000012647 I 0.690
RFX6 Gallus gallus ENSGALG00000014918 I 0.662
rfx6 Gasterosteus aculeatus ENSGACG00000005840 I 0.662
rfx4 Gasterosteus aculeatus ENSGACG00000011830 I 0.690
Gfo_R004629 Geospiza fortis Gfo_R004629 I 0.690
Gfo_R016155 Geospiza fortis Gfo_R016155 I 0.662
RFX6 Gorilla gorilla ENSGGOG00000006982 I 0.671
RFX4 Gorilla gorilla ENSGGOG00000007759 I 0.690
HelroG184328 Helobdella robusta HelroG184328 I 0.677
RFX3 Homo sapiens ENSG00000080298 D 0.657
RFX4 Homo sapiens ENSG00000111783 D 0.703
RFX6 Homo sapiens ENSG00000185002 I 0.662
ENSSTOG00000012365 Ictidomys tridecemlineatus ENSSTOG00000012365 I 0.662
ENSSTOG00000015740 Ictidomys tridecemlineatus ENSSTOG00000015740 I 0.691
ENSLACG00000004044 Latimeria chalumnae ENSLACG00000004044 I 0.662
ENSLACG00000017280 Latimeria chalumnae ENSLACG00000017280 I 0.690
ENSLOCG00000015258 Lepisosteus oculatus ENSLOCG00000015258 I 0.690
ENSLOCG00000017133 Lepisosteus oculatus ENSLOCG00000017133 I 0.662
LotgiG113173 Lottia gigantea LotgiG113173 I 0.684
LotgiG122187 Lottia gigantea LotgiG122187 I 0.663
RFX6 Loxodonta africana ENSLAFG00000003465 I 0.662
RFX4 Loxodonta africana ENSLAFG00000014122 I 0.690
RFX3 Loxodonta africana ENSLAFG00000021602 I 0.657
ENSMMUP00000022612 Macaca fascicularis ENSMMUP00000022612 I 0.662
ENSP00000350552 Macaca fascicularis ENSP00000350552 I 0.690
RFX3 Macaca mulatta ENSMMUG00000000802 I 0.657
RFX6 Macaca mulatta ENSMMUG00000017189 I 0.662
RFX4 Macaca mulatta ENSMMUG00000022118 I 0.690
ENSMEUG00000007718 Macropus eugenii ENSMEUG00000007718 I 0.699
RFX4 Meleagris gallopavo ENSMGAG00000012867 I 0.690
RFX6 Meleagris gallopavo ENSMGAG00000013368 I 0.662
RFX6 Monodelphis domestica ENSMODG00000017815 I 0.662
ENSMPUG00000012144 Mustela putorius furo ENSMPUG00000012144 I 0.687
ENSMPUG00000014252 Mustela putorius furo ENSMPUG00000014252 I 0.662
Rfx6 Mus musculus ENSMUSG00000019900 D 0.660
Rfx4 Mus musculus ENSMUSG00000020037 D 0.690
Myotis_brandtii_RFX4_10020417 Myotis brandtii Myotis_brandtii_RFX4_10020417 I 0.690
Myotis_brandtii_RFX6_10035596 Myotis brandtii Myotis_brandtii_RFX6_10035596 I 0.670
RFX6 Myotis lucifugus ENSMLUG00000006665 I 0.662
RFX4 Myotis lucifugus ENSMLUG00000016257 I 0.690
NEMVEDRAFT_v1g122918 Nematostella vectensis NEMVEDRAFT_v1g122918 I 0.653
ENSNLEG00000006695 Nomascus leucogenys ENSNLEG00000006695 I 0.690
ENSNLEG00000013258 Nomascus leucogenys ENSNLEG00000013258 I 0.662
RFX1 Ochotona princeps ENSOPRG00000003641 I 0.661
RFX4 Ochotona princeps ENSOPRG00000008616 I 0.690
Ocbimv22008419m.g Octopus bimaculoides Ocbimv22008419m.g I 0.653
Ocbimv22026231m.g Octopus bimaculoides Ocbimv22026231m.g I 0.658
Ogr10888 Ophisaurus gracilis Ogr10888 I 0.671
ENSONIG00000014750 Oreochromis niloticus ENSONIG00000014750 I 0.690
ENSONIG00000015740 Oreochromis niloticus ENSONIG00000015740 I 0.662
ENSOANG00000005534 Ornithorhynchus anatinus ENSOANG00000005534 I 0.690
RFX6 Oryctolagus cuniculus ENSOCUG00000013227 I 0.662
ENSOCUG00000023815 Oryctolagus cuniculus ENSOCUG00000023815 I 0.661
RFX4 Oryctolagus cuniculus ENSOCUG00000028228 I 0.690
rfx4 Oryzias latipes ENSORLG00000011114 I 0.690
ENSORLG00000018626 Oryzias latipes ENSORLG00000018626 I 0.656
RFX4 Otolemur garnettii ENSOGAG00000003546 I 0.690
RFX6 Otolemur garnettii ENSOGAG00000011937 I 0.662
ENSOARG00000008929 Ovis aries ENSOARG00000008929 I 0.662
ENSOARG00000017616 Ovis aries ENSOARG00000017616 I 0.690
RFX4 Pan troglodytes ENSPTRG00000005391 I 0.690
RFX6 Pan troglodytes ENSPTRG00000018540 I 0.662
ENSPANG00000006357 Papio anubis ENSPANG00000006357 I 0.690
ENSPANG00000008240 Papio anubis ENSPANG00000008240 I 0.662
PHUM236330 Pediculus humanus PHUM236330 I 0.665
ENSPSIG00000008368 Pelodiscus sinensis ENSPSIG00000008368 I 0.662
ENSPSIG00000015178 Pelodiscus sinensis ENSPSIG00000015178 I 0.690
ENSPFOG00000003162 Poecilia formosa ENSPFOG00000003162 I 0.662
ENSPFOG00000016523 Poecilia formosa ENSPFOG00000016523 I 0.690
ENSPPYG00000004906 Pongo abelii ENSPPYG00000004906 I 0.690
ENSPPYG00000016960 Pongo abelii ENSPPYG00000016960 I 0.662
RFX4 Procavia capensis ENSPCAG00000005023 I 0.693
RFX6 Pteropus vampyrus ENSPVAG00000000614 I 0.662
RFX4 Pteropus vampyrus ENSPVAG00000005862 I 0.690
Rfx4 Rattus norvegicus ENSRNOG00000051536 I 0.673
nRc.2.0.1.g09916 Romanomermis culicivorax nRc.2.0.1.g09916 I 0.653
Sakowv30020492m.g Saccoglossus kowalevskii Sakowv30020492m.g I 0.658
Sakowv30020494m.g Saccoglossus kowalevskii Sakowv30020494m.g I 0.659
Sakowv30039514m.g Saccoglossus kowalevskii Sakowv30039514m.g I 0.688
ENSSHAG00000009393 Sarcophilus harrisii ENSSHAG00000009393 I 0.662
ENSSHAG00000013027 Sarcophilus harrisii ENSSHAG00000013027 I 0.690
SMAR001902 Strigamia maritima SMAR001902 I 0.659
SMAR011197 Strigamia maritima SMAR011197 I 0.685
SPU_011477 Strongylocentrotus purpuratus SPU_011477 I 0.665
SPU_020781 Strongylocentrotus purpuratus SPU_020781 I 0.658
SPU_025817 Strongylocentrotus purpuratus SPU_025817 I 0.662
ENSSSCG00000000168 Sus scrofa ENSSSCG00000000168 I 0.673
ENSTGUG00000011025 Taeniopygia guttata ENSTGUG00000011025 I 0.690
RFX6 Taeniopygia guttata ENSTGUG00000011924 I 0.662
rfx6 Takifugu rubripes ENSTRUG00000008447 I 0.664
rfx4 Takifugu rubripes ENSTRUG00000008925 I 0.687
ENSTSYG00000008237 Tarsius syrichta ENSTSYG00000008237 I 0.662
ENSTSYG00000008562 Tarsius syrichta ENSTSYG00000008562 I 0.677
tetur18g01090 Tetranychus urticae tetur18g01090 I 0.677
rfx6 Tetraodon nigroviridis ENSTNIG00000009728 I 0.662
rfx4 Tetraodon nigroviridis ENSTNIG00000012137 I 0.687
TriadG51266 Trichoplax adhaerens TriadG51266 I 0.658
RFX6 Tupaia belangeri ENSTBEG00000011557 I 0.659
RFX4 Tupaia belangeri ENSTBEG00000014680 I 0.690
RFX4 Tursiops truncatus ENSTTRG00000010688 I 0.690
RFX6 Tursiops truncatus ENSTTRG00000011052 I 0.662
Tal_R000797 Tyto alba Tal_R000797 I 0.653
RFX6 Vicugna pacos ENSVPAG00000002198 I 0.662
RFX4 Vicugna pacos ENSVPAG00000008521 I 0.699
rfx6.L Xenopus laevis XB-GENE-6488525 I 0.662
rfx6 Xenopus tropicalis XB-GENE-1013164 I 0.662
ENSXMAG00000001638 Xiphophorus maculatus ENSXMAG00000001638 I 0.690
ENSXMAG00000015726 Xiphophorus maculatus ENSXMAG00000015726 I 0.662