SAPIO_CDS9685 (Scedosporium apiospermum)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 SAPIO_CDS9685 T318779_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.675 0.513
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.675 0.513
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.675 0.513
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.675 0.513
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.675 0.513
daf-19
M00709_2.00 		Caenorhabditis elegans
SGTTRCTADG
CHTAGYAACS		 PBM
Narasimhan et al.(2015)
pTH10021 		0.659 0.449
RFX2
M02449_2.00 		Homo sapiens
BGTHRYYADG
CHTRRYDACV		 PBM
Weirauch et al.(2014)
pTH9194 		0.652 0.397
RFX2
M02450_2.00 		Ornithorhynchus anatinus
NGTHRYYANV
BNTRRYDACN		 PBM
Weirauch et al.(2014)
pTH9269 		0.652 0.397
XP_002157607.1
M02456_2.00 		Hydra magnipapillata
GTHDYYDNVN
NBNHRRHDAC		 PBM
Weirauch et al.(2014)
pTH9199 		0.651 0.410
G4VLF2_SCHMA
M02452_2.00 		Schistosoma mansoni
GTTGCTAD
HTAGCAAC		 PBM
Weirauch et al.(2014)
pTH8587 		0.650 0.397
Sjc_0102030
M02455_2.00 		Schistosoma japonicum
GTTRCYANG
CNTRGYAAC		 PBM
Weirauch et al.(2014)
pTH9285 		0.650 0.397
Rfx
M03959_2.00 		Drosophila melanogaster
NGTHRCYATRGYDACN
NGTHRCYATRGYDACN		 SELEX
Nitta et al.(2015)
Rfx_1 		0.650 0.385
Rfx
M03960_2.00 		Drosophila melanogaster
GTTGCTARGCAAC
GTTGCYTAGCAAC		 SELEX
Nitta et al.(2015)
Rfx_2 		0.650 0.385
Rfx
M03961_2.00 		Drosophila melanogaster
BGTWRCCATGGYWACV
BGTWRCCATGGYWACV		 SELEX
Nitta et al.(2015)
Rfx_3 		0.650 0.385
Rfx
M03962_2.00 		Drosophila melanogaster
GTTRCYAWTRGYAAC
GTTRCYAWTRGYAAC		 SELEX
Nitta et al.(2015)
Rfx_4 		0.650 0.385
Rfx
M03963_2.00 		Drosophila melanogaster
GTTGCTARGCAAC
GTTGCYTAGCAAC		 SELEX
Nitta et al.(2015)
Rfx_5 		0.650 0.385
Rfx3
M00188_2.00 		Mus musculus
SNTRRHDACN
NGTHDYYANS		 PBM
Badis et al.(2009)
Rfx3_3961 		0.650 0.385
Rfx3
M03463_2.00 		Mus musculus
SGTTRCCATGGYAACS
SGTTRCCATGGYAACS		 SELEX
Jolma et al.(2013)
Rfx3_1 		0.650 0.385
Rfx3
M09368_2.00 		Mus musculus
BBGTTGCCATGGNRAC
GTYNCCATGGCAACVV		 Misc
Kulakovskiy et al.(2013)
RFX3_MOUSE.H11MO.0.C 		0.650 0.385
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEZ39728 RFX 200 277

Links

Other RFX family TFs
Other Scedosporium apiospermum TFs

313 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000002650 Anas platyrhynchos ENSAPLG00000002650 I
CEBPD Anolis carolinensis ENSACAG00000012009 I
ENSAMXG00000025594 Astyanax mexicanus ENSAMXG00000025594 I
CEBPD Callithrix jacchus ENSCJAG00000013678 I
ENSCPOG00000025482 Cavia porcellus ENSCPOG00000025482 I
Cmyd_10014862 Chelonia mydas Cmyd_10014862 I
cebpd Danio rerio ENSDARG00000087303 I
CEBPD Dasypus novemcinctus ENSDNOG00000025666 I
ENSFALG00000014184 Ficedula albicollis ENSFALG00000014184 I
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I
cebpd Gasterosteus aculeatus ENSGACG00000017927 I
CEBPD Gorilla gorilla ENSGGOG00000008077 I
CEBPD Homo sapiens ENSG00000221869 D
ENSSTOG00000021236 Ictidomys tridecemlineatus ENSSTOG00000021236 I
ENSLACG00000015084 Latimeria chalumnae ENSLACG00000015084 I
ENSLOCG00000017816 Lepisosteus oculatus ENSLOCG00000017816 I
CEBPD Macaca mulatta ENSMMUG00000013151 I
CEBPD Monodelphis domestica ENSMODG00000010525 I
ENSMPUG00000001146 Mustela putorius furo ENSMPUG00000001146 I
Cebpd Mus musculus BAE29047.1 D
ENSONIG00000021429 Oreochromis niloticus ENSONIG00000021429 I
ENSOANG00000007261 Ornithorhynchus anatinus ENSOANG00000007261 I
ENSOCUG00000025135 Oryctolagus cuniculus ENSOCUG00000025135 I
CEBPD Otolemur garnettii ENSOGAG00000030449 I
ENSOARG00000011169 Ovis aries ENSOARG00000011169 I
CEBPD Pan troglodytes ENSPTRG00000042020 I
ENSPANG00000024953 Papio anubis ENSPANG00000024953 I
ENSPFOG00000020361 Poecilia formosa ENSPFOG00000020361 I
Pvit_15371 Pogona vitticeps Pvit_15371 I
Cebpd Rattus norvegicus ENSRNOG00000050869 D
ENSSSCG00000006276 Sus scrofa ENSSSCG00000006276 I
CEBPD Taeniopygia guttata ENSTGUG00000010839 I
cebpd Tetraodon nigroviridis ENSTNIG00000000222 I
cebpd.L Xenopus laevis XB-GENE-17330367 I
cebpd.S Xenopus laevis XB-GENE-866497 I
cebpd Xenopus tropicalis XB-GENE-853588 I
ENSXMAG00000019437 Xiphophorus maculatus ENSXMAG00000019437 I