RUNX2 (Sus scrofa)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSSSCG00000001710 T319488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.878 0.878
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.878 0.878
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.878 0.878
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.878 0.878
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.878 0.878
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.878 0.878
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.878 0.878
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.878 0.878
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.878 0.878
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.878 0.878
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.878 0.878
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.878 0.878
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.776 0.776
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.776 0.776
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.776 0.776
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.776 0.776
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.776 0.776
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.776 0.776
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.776 0.776
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.776 0.776
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.776 0.776
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.776 0.776
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.776 0.776
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.776 0.776
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.776 0.776
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.776 0.776
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.776 0.776
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.776 0.776
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.776 0.776
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.776 0.776
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.776 0.776
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.776 0.776
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.776 0.776
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.776 0.776
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.776 0.776
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000001863 Runt 87 135

Links

Other Runt family TFs
Other Sus scrofa TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.878
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.878
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.755
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.857
RUNX2 Bos taurus ENSBTAG00000004104 I 0.878
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.796
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.878
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.878
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.878
runx2a Danio rerio ENSDARG00000040261 I 0.878
runx2b Danio rerio ENSDARG00000059233 I 0.857
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.776
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.878
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.878
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.837
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.878
RUNX2 Homo sapiens ENSG00000124813 D 0.878
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.878
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.878
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.755
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.776
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.878
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.755
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.878
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.878
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.755
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.776
Runx2 Mus musculus ENSMUSG00000039153 D 0.878
Runx1 Mus musculus ENSMUSG00000022952 D 0.776
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.878
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.755
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.878
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.878
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.878
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.878
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.878
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.776
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.755
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.878
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.878
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.755
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.878
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.857
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.735
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.776
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.776
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.776
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.878
runx2.L Xenopus laevis XB-GENE-864817 I 0.872
XP_002939386 Xenopus tropicalis XP_002939386 I 0.755
XP_002939387 Xenopus tropicalis XP_002939387 I 0.755