SMAR009403 (Strigamia maritima)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 SMAR009403 T319623_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.793 0.793
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.793 0.793
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.793 0.793
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.793 0.793
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.793 0.793
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.793 0.793
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.793 0.793
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.793 0.793
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.793 0.793
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.793 0.793
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.793 0.793
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.793 0.793
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.793 0.793
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.793 0.793
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.793 0.793
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.793 0.793
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.783 0.783
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.783 0.783
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.783 0.783
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.783 0.783
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.783 0.783
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.783 0.783
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.783 0.783
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.783 0.783
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.783 0.783
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.783 0.783
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.783 0.783
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.783 0.783
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.783 0.783
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.783 0.783
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.783 0.783
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.783 0.783
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.783 0.783
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.783 0.783
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.783 0.783
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.783 0.783
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.783 0.783
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.783 0.783
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.783 0.783
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.783 0.783
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR009403-PA Runt 30 121

Links

Other Runt family TFs
Other Strigamia maritima TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_08931 Ancylostoma duodenale ANCDUO_08931 N
ENSACAG00000021966 Anolis carolinensis ENSACAG00000021966 N
AALB000418 Anopheles albimanus AALB000418 N
AALB008494 Anopheles albimanus AALB008494 N
AARA000519 Anopheles arabiensis AARA000519 N
AARA011012 Anopheles arabiensis AARA011012 N
ACHR009209 Anopheles christyi ACHR009209 N
ACUA015629 Anopheles culicifacies ACUA015629 N
ACUA021057 Anopheles culicifacies ACUA021057 N
ADAC003415 Anopheles darlingi ADAC003415 N
ADIR000206 Anopheles dirus ADIR000206 N
ADIR010893 Anopheles dirus ADIR010893 N
AEPI004512 Anopheles epiroticus AEPI004512 N
AEPI001840 Anopheles epiroticus AEPI001840 N
AEPI001846 Anopheles epiroticus AEPI001846 N
AFAF003029 Anopheles farauti AFAF003029 N
AFUN010566 Anopheles funestus AFUN010566 N
AGAP011711 Anopheles gambiae AGAP011711 N
AMEC021395 Anopheles melas AMEC021395 N
AMEM001115 Anopheles merus AMEM001115 N
AMEM003406 Anopheles merus AMEM003406 N
AQUA000258 Anopheles quadriannulatus AQUA000258 N
AQUA010448 Anopheles quadriannulatus AQUA010448 N
ASIS022478 Anopheles sinensis ASIS022478 N
ASTEI08594 Anopheles stephensi ASTEI08594 N
ACEP16062 Atta cephalotes ACEP16062 N
ACEP21923 Atta cephalotes ACEP21923 N
BGLB004779 Biomphalaria glabrata BGLB004779 N
BGIBMGA003173 Bombyx mori BGIBMGA003173 N
BGIBMGA012897 Bombyx mori BGIBMGA012897 N
TBR1 Choloepus hoffmanni ENSCHOG00000006154 N
KGM_15499 Danaus plexippus KGM_15499 N
DILT_0001817101 Diphyllobothrium latum DILT_0001817101 N
GG18705 Drosophila erecta FBgn0110914 N
GD16690 Drosophila simulans FBgn0188279 N
GPUH_0000570001 Gongylonema pulchrum GPUH_0000570001 N
GPUH_0000522701 Gongylonema pulchrum GPUH_0000522701 N
Hsal_09267--XP_394607.3_APIME Harpegnathos saltator Hsal_09267--XP_394607.3_APIME N
ENSLACG00000004796 Latimeria chalumnae ENSLACG00000004796 N
LDEC003105 Leptinotarsa decemlineata LDEC003105 N
LLOJ003748 Lutzomyia longipalpis LLOJ003748 N
NEMVEDRAFT_v1g57075 Nematostella vectensis NEMVEDRAFT_v1g57075 N
Ocbimv22001570m.g Octopus bimaculoides Ocbimv22001570m.g N
SNAPOd2T00025689001 Oikopleura dioica SNAPOd2T00025689001 N
nOo.2.0.1.g11026 Onchocerca ochengi nOo.2.0.1.g11026 N
nOo.2.0.1.g05407 Onchocerca ochengi nOo.2.0.1.g05407 N
nOo.2.0.1.g11992 Onchocerca ochengi nOo.2.0.1.g11992 N
ENSOANG00000030458 Ornithorhynchus anatinus ENSOANG00000030458 N
ENSPMAG00000002216 Petromyzon marinus ENSPMAG00000002216 N
PPAI002081 Phlebotomus papatasi PPAI002081 N
PPAI007558 Phlebotomus papatasi PPAI007558 N
PPAI007566 Phlebotomus papatasi PPAI007566 N
PXEA_0001168701 Protopolystoma xenopodis PXEA_0001168701 N
PXEA_0002770801 Protopolystoma xenopodis PXEA_0002770801 N
PXEA_0000565701 Protopolystoma xenopodis PXEA_0000565701 N
RPRC007267 Rhodnius prolixus RPRC007267 N
SSLN_0000607001 Schistocephalus solidus SSLN_0000607001 N
SMTD_0001338101 Schistosoma mattheei SMTD_0001338101 N
SINV19991 Solenopsis invicta SINV19991 N
SINV10896 Solenopsis invicta SINV10896 N
ENSSARG00000001033 Sorex araneus ENSSARG00000001033 I
SPER_0003400201 Spirometra erinaceieuropaei SPER_0003400201 N
TsM_000048500 Taenia solium TsM_000048500 N
ENSTSYG00000002965 Tarsius syrichta ENSTSYG00000002965 I
TRE_0001960401 Trichobilharzia regenti TRE_0001960401 N
TBX19 Tupaia belangeri ENSTBEG00000000750 N
WUBG_08150 Wuchereria bancrofti WUBG_08150 N
L798_14237 Zootermopsis nevadensis L798_14237 N