TC006536 (Tribolium castaneum)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 TC006536 T319629_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.769 0.769
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.769 0.769
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.769 0.769
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.769 0.769
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.769 0.769
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.769 0.769
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.769 0.769
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.769 0.769
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.769 0.769
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.769 0.769
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.769 0.769
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.769 0.769
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.769 0.769
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.769 0.769
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.769 0.769
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.769 0.769
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.762 0.762
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.762 0.762
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.762 0.762
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.762 0.762
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.762 0.762
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.762 0.762
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.762 0.762
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.762 0.762
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.762 0.762
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.762 0.762
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.762 0.762
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.762 0.762
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.762 0.762
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.762 0.762
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.762 0.762
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.762 0.762
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.762 0.762
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.762 0.762
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.762 0.762
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.762 0.762
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.762 0.762
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.762 0.762
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.762 0.762
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.762 0.762
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC006536-PA Runt 69 198

Links

Other Runt family TFs
Other Tribolium castaneum TFs

408 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008086 Ailuropoda melanoleuca ENSAMEG00000008086 I
ENSAMEG00000010314 Ailuropoda melanoleuca ENSAMEG00000010314 I
ENSAPLG00000013017 Anas platyrhynchos ENSAPLG00000013017 I
NFATC1 Anolis carolinensis ENSACAG00000000941 I
NFATC3 Anolis carolinensis ENSACAG00000009839 I
Afo_R009327 Aptenodytes forsteri Afo_R009327 I
ENSAMXG00000005881 Astyanax mexicanus ENSAMXG00000005881 I
ENSAMXG00000011048 Astyanax mexicanus ENSAMXG00000011048 I
ENSAMXG00000017687 Astyanax mexicanus ENSAMXG00000017687 I
ENSAMXG00000018016 Astyanax mexicanus ENSAMXG00000018016 I
ENSBTAP00000000859-D1 Bos grunniens ENSBTAP00000000859-D1 I
ENSP00000300659-D1 Bos grunniens ENSP00000300659-D1 I
NFATC1 Bos taurus ENSBTAG00000000656 I
NFATC3 Bos taurus ENSBTAG00000004368 I
Brh_R004055 Buceros rhinoceros Brh_R004055 I
NFATC3 Callithrix jacchus ENSCJAG00000015726 I
NFATC1 Callithrix jacchus ENSCJAG00000023446 I
Aan_R003860 Calypte anna Aan_R003860 I
Aan_R015322 Calypte anna Aan_R015322 I
NFATC1 Canis familiaris ENSCAFG00000000011 I
NFATC3 Canis familiaris ENSCAFG00000020324 I
NFATC1 Cavia porcellus ENSCPOG00000003999 I
Cmyd_10021444 Chelonia mydas Cmyd_10021444 I
ENSCSAG00000004060 Chlorocebus sabaeus ENSCSAG00000004060 I
ENSCSAG00000018247 Chlorocebus sabaeus ENSCSAG00000018247 I
nfatc1 Danio rerio ENSDARG00000036168 I
nfatc3b Danio rerio ENSDARG00000051729 I
nfatc3a Danio rerio ENSDARG00000076297 I
NFATC3 Dasypus novemcinctus ENSDNOG00000018583 I
NFATC1 Dasypus novemcinctus ENSDNOG00000025306 I
ENSDORG00000002730 Dipodomys ordii ENSDORG00000002730 I
NFATC1 Echinops telfairi ENSETEG00000010848 I
NFATC3 Equus caballus ENSECAG00000014089 I
NFATC1 Equus caballus ENSECAG00000019813 I
NFATC1 Felis catus ENSFCAG00000000884 I
NFATC3 Felis catus ENSFCAG00000030997 I
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I
ENSFALG00000013333 Ficedula albicollis ENSFALG00000013333 I
ENSGMOG00000006631 Gadus morhua ENSGMOG00000006631 I
ENSGMOG00000017004 Gadus morhua ENSGMOG00000017004 I
NFATC3 Gallus gallus ENSGALG00000003396 I
ENSGALG00000012654 Gallus gallus ENSGALG00000012654 I
nfatc1 Gasterosteus aculeatus ENSGACG00000002545 I
NFATC1 Gasterosteus aculeatus ENSGACG00000005481 I
ENSGACG00000008153 Gasterosteus aculeatus ENSGACG00000008153 I
ENSGACG00000011086 Gasterosteus aculeatus ENSGACG00000011086 I
nfatc3a Gasterosteus aculeatus ENSGACG00000016365 I
Gfo_R000615 Geospiza fortis Gfo_R000615 I
Gfo_R015940 Geospiza fortis Gfo_R015940 I
NFATC1 Gorilla gorilla ENSGGOG00000006879 I
NFATC3 Homo sapiens ENSG00000072736 D
NFATC1 Homo sapiens ENSG00000131196 D
ENSSTOG00000008168 Ictidomys tridecemlineatus ENSSTOG00000008168 I
ENSSTOG00000022700 Ictidomys tridecemlineatus ENSSTOG00000022700 I
ENSLACG00000001332 Latimeria chalumnae ENSLACG00000001332 I
ENSLOCG00000007875 Lepisosteus oculatus ENSLOCG00000007875 I
ENSLOCG00000008087 Lepisosteus oculatus ENSLOCG00000008087 I
NFATC1 Loxodonta africana ENSLAFG00000008297 I
NFATC3 Loxodonta africana ENSLAFG00000014599 I
ENSMMUP00000029747 Macaca fascicularis ENSMMUP00000029747 I
ENSP00000300659 Macaca fascicularis ENSP00000300659 I
NFATC3 Macaca mulatta ENSMMUG00000021843 I
NFATC1 Macaca mulatta ENSMMUG00000022596 I
ENSMEUG00000011495 Macropus eugenii ENSMEUG00000011495 I
NFATC1 Meleagris gallopavo ENSMGAG00000002215 D
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I
NFATC1 Monodelphis domestica ENSMODG00000012018 D
ENSMPUG00000006942 Mustela putorius furo ENSMPUG00000006942 I
ENSMPUG00000016650 Mustela putorius furo ENSMPUG00000016650 I
Nfatc3 Mus musculus ENSMUSG00000031902 D
Nfatc1 Mus musculus ENSMUSG00000033016 D
Myotis_brandtii_NFATC1_10034214 Myotis brandtii Myotis_brandtii_NFATC1_10034214 I
NFATC1 Myotis lucifugus ENSMLUG00000001296 I
NFATC3 Myotis lucifugus ENSMLUG00000005918 I
ENSNLEG00000005116 Nomascus leucogenys ENSNLEG00000005116 I
ENSNLEG00000008307 Nomascus leucogenys ENSNLEG00000008307 I
NFATC1 Ochotona princeps ENSOPRG00000008019 I
ENSONIG00000002481 Oreochromis niloticus ENSONIG00000002481 I
ENSONIG00000007307 Oreochromis niloticus ENSONIG00000007307 I
ENSONIG00000013792 Oreochromis niloticus ENSONIG00000013792 I
NFATC3 Oryctolagus cuniculus ENSOCUG00000010052 I
nfatc1 Oryzias latipes ENSORLG00000008055 I
nfatc3a Oryzias latipes ENSORLG00000011964 I
NFATC1 Oryzias latipes ENSORLG00000020716 I
NFATC1 Otolemur garnettii ENSOGAG00000008159 I
NFATC3 Otolemur garnettii ENSOGAG00000032524 I
ENSOARG00000003342 Ovis aries ENSOARG00000003342 I
ENSOARG00000004215 Ovis aries ENSOARG00000004215 I
NFATC3 Pan troglodytes ENSPTRG00000008260 I
NFATC1 Pan troglodytes ENSPTRG00000010129 I
ENSPANG00000014019 Papio anubis ENSPANG00000014019 I
ENSPANG00000018698 Papio anubis ENSPANG00000018698 I
ENSPSIG00000011711 Pelodiscus sinensis ENSPSIG00000011711 I
ENSPFOG00000006116 Poecilia formosa ENSPFOG00000006116 I
ENSPFOG00000019133 Poecilia formosa ENSPFOG00000019133 I
Pvit_05133 Pogona vitticeps Pvit_05133 I
Pvit_07799 Pogona vitticeps Pvit_07799 I
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I
ENSPPYG00000009255 Pongo abelii ENSPPYG00000009255 I
NFATC3 Procavia capensis ENSPCAG00000005143 I
NFATC2 Pteropus vampyrus ENSPVAG00000003626 I
NFATC3 Pteropus vampyrus ENSPVAG00000016625 I
Nfatc1 Rattus norvegicus ENSRNOG00000017146 I
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I
ENSSHAG00000009139 Sarcophilus harrisii ENSSHAG00000009139 I
ENSSHAG00000010150 Sarcophilus harrisii ENSSHAG00000010150 I
NFATC1 Taeniopygia guttata ENSTGUG00000006621 I
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I
nfatc3a Takifugu rubripes ENSTRUG00000007833 I
ENSTRUG00000017422 Takifugu rubripes ENSTRUG00000017422 I
nfatc1 Tetraodon nigroviridis ENSTNIG00000002929 I
nfatc3a Tetraodon nigroviridis ENSTNIG00000011351 I
NFATC3 Tursiops truncatus ENSTTRG00000014611 I
NFATC1 Tursiops truncatus ENSTTRG00000016530 I
Tal_R012379 Tyto alba Tal_R012379 I
NFATC3 Vicugna pacos ENSVPAG00000002581 I
nfatc3.S Xenopus laevis XB-GENE-866300 I
nfatc1.L Xenopus laevis XB-GENE-876764 I
nfatc3 Xenopus tropicalis XB-GENE-493918 I
nfatc1 Xenopus tropicalis XB-GENE-876756 D
ENSXMAG00000000761 Xiphophorus maculatus ENSXMAG00000000761 I
ENSXMAG00000009087 Xiphophorus maculatus ENSXMAG00000009087 I
ENSXMAG00000012291 Xiphophorus maculatus ENSXMAG00000012291 I
ENSXMAG00000017348 Xiphophorus maculatus ENSXMAG00000017348 I