tetur01g02340 (Tetranychus urticae)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 tetur01g02340 T319631_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.769 0.769
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.769 0.769
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.769 0.769
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.769 0.769
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.762 0.762
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.762 0.762
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.762 0.762
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.762 0.762
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.762 0.762
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.762 0.762
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.762 0.762
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.762 0.762
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.762 0.762
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.762 0.762
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.762 0.762
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.762 0.762
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.746 0.746
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.746 0.746
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.746 0.746
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.746 0.746
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.746 0.746
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.746 0.746
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.746 0.746
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.746 0.746
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.746 0.746
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.746 0.746
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.746 0.746
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.746 0.746
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.738 0.738
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.738 0.738
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.738 0.738
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.738 0.738
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.738 0.738
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.738 0.738
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.738 0.738
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.738 0.738
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.738 0.738
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.738 0.738
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.738 0.738
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.738 0.738
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
tetur01g02340.1 Runt 8 137

Links

Other Runt family TFs
Other Tetranychus urticae TFs

380 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004881 Ailuropoda melanoleuca ENSAMEG00000004881 I 0.000
Alligator_sinensis_CCG014463.1 Alligator sinensis Alligator_sinensis_CCG014463.1 I 0.000
ENSAPLG00000007530 Anas platyrhynchos ENSAPLG00000007530 I 0.000
NFE2L1 Anolis carolinensis ENSACAG00000006615 I 0.000
Afo_R006596 Aptenodytes forsteri Afo_R006596 I 0.000
ENSAMXG00000010551 Astyanax mexicanus ENSAMXG00000010551 I 0.000
ENSP00000354855-D1 Bos grunniens ENSP00000354855-D1 I 0.000
NFE2L1 Bos taurus ENSBTAG00000013653 I 0.000
Brh_R008979 Buceros rhinoceros Brh_R008979 I 0.000
NFE2L1 Callithrix jacchus ENSCJAG00000007542 I 0.000
NFE2L1 Canis familiaris ENSCAFG00000023139 I 0.000
Cmyd_10015825 Chelonia mydas Cmyd_10015825 I 0.000
ENSCSAG00000002550 Chlorocebus sabaeus ENSCSAG00000002550 I 0.000
nfe2l1b Danio rerio ENSDARG00000076533 I 0.000
NFE2L1 Dasypus novemcinctus ENSDNOG00000047006 I 0.000
Nfe2l1 Dipodomys ordii ENSDORG00000000715 I 0.000
NFE2L1 Echinops telfairi ENSETEG00000014473 I 0.000
NFE2L1 Erinaceus europaeus ENSEEUG00000009322 I 0.000
NFE2L1 Felis catus ENSFCAG00000009369 I 0.000
ENSFALG00000011429 Ficedula albicollis ENSFALG00000011429 I 0.000
ENSGMOG00000003077 Gadus morhua ENSGMOG00000003077 I 0.000
NFE2L1 Gallus gallus ENSGALG00000011937 I 0.000
NFE2L1 Gasterosteus aculeatus ENSGACG00000003904 I 0.000
Gfo_R001844 Geospiza fortis Gfo_R001844 I 0.000
NFE2L1 Gorilla gorilla ENSGGOG00000002268 I 0.000
NFE2L1 Homo sapiens ENSG00000082641 D 0.000
ENSSTOG00000013664 Ictidomys tridecemlineatus ENSSTOG00000013664 I 0.000
NFE2L1 Loxodonta africana ENSLAFG00000018523 I 0.000
ENSP00000354855 Macaca fascicularis ENSP00000354855 I 0.000
NFE2L1 Macaca mulatta ENSMMUG00000021935 I 0.000
ENSMEUG00000011499 Macropus eugenii ENSMEUG00000011499 I 0.000
NFE2L1 Meleagris gallopavo ENSMGAG00000001269 I 0.000
NFE2L1 Microcebus murinus ENSMICG00000014716 I 0.000
NFE2L1 Monodelphis domestica ENSMODG00000012375 I 0.000
ENSMPUG00000015301 Mustela putorius furo ENSMPUG00000015301 I 0.000
Nfe2l1 Mus musculus ENSMUSG00000038615 D 0.000
Myotis_brandtii_NFE2L1_10030443 Myotis brandtii Myotis_brandtii_NFE2L1_10030443 I 0.000
NFE2L1 Myotis lucifugus ENSMLUG00000005024 I 0.000
ENSNLEG00000002415 Nomascus leucogenys ENSNLEG00000002415 I 0.000
NFE2L1 Ochotona princeps ENSOPRG00000003683 I 0.000
Ogr12586 Ophisaurus gracilis Ogr12586 I 0.000
ENSONIG00000018214 Oreochromis niloticus ENSONIG00000018214 I 0.000
ENSOANG00000000315 Ornithorhynchus anatinus ENSOANG00000000315 I 0.000
NFE2L1 Oryctolagus cuniculus ENSOCUG00000022298 I 0.000
NFE2L1 Otolemur garnettii ENSOGAG00000025191 I 0.000
NFE2L1 Pan troglodytes ENSPTRG00000022631 I 0.000
ENSPANG00000022904 Papio anubis ENSPANG00000022904 I 0.000
ENSPSIG00000004101 Pelodiscus sinensis ENSPSIG00000004101 I 0.000
ENSPSIG00000007945 Pelodiscus sinensis ENSPSIG00000007945 I 0.000
Pvit_13965 Pogona vitticeps Pvit_13965 I 0.000
ENSPPYG00000008890 Pongo abelii ENSPPYG00000008890 I 0.000
NFE2L1 Pteropus vampyrus ENSPVAG00000002566 I 0.000
NFE2L1 Sorex araneus ENSSARG00000002776 I 0.000
ENSTSYG00000011468 Tarsius syrichta ENSTSYG00000011468 I 0.000
NFE2L1 Tupaia belangeri ENSTBEG00000009449 I 0.000
NFE2L1 Tursiops truncatus ENSTTRG00000016554 I 0.000
NFE2L1 Vicugna pacos ENSVPAG00000010116 I 0.000