CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAM011616
(
Anopheles maculatus
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
AMAM011616
T319752_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.880
0.880
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.880
0.880
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.880
0.880
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.880
0.880
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN
NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.720
0.720
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.720
0.720
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.720
0.720
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR
YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.720
0.720
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.720
0.720
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR
YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.720
0.720
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.720
0.720
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.720
0.720
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.720
0.720
RUNX2
M11255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.720
0.720
RUNX2
M11256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.720
0.720
RUNX2
M11257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.720
0.720
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.720
0.720
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAM011616-PA
Runt
1
25
LPQVTTYCKAIKVTVDGPREPRSKT
Links
Other
Runt
family TFs
Other
Anopheles maculatus
TFs
223 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_04483
Arthroderma otae
MCYG_04483
N
0.000
fgenesh1_pg.00772_#_76
Aspergillus carbonarius
fgenesh1_pg.00772_#_76
N
0.000
ACLA_080560
Aspergillus clavatus
CADACLAG00007888
N
0.000
CADAFLAG00005961
Aspergillus flavus
CADAFLAG00005961
N
0.000
AFUA_2G08700
Aspergillus fumigatus
CADAFUAG00004658
N
0.000
ANIA_06124
Aspergillus nidulans
CADANIAG00006888
N
0.000
CADANGAG00009847
Aspergillus niger
CADANGAG00009847
N
0.000
EURHEDRAFT_464263
Aspergillus ruber
EURHEDRAFT_464263
N
0.000
ATEG_09704
Aspergillus terreus
CADATEAG00004438
N
0.000
BDDG_04882
Blastomyces dermatitidis
BDDG_04882
N
0.000
PVAR5_1693
Byssochlamys spectabilis
PVAR5_1693
N
0.000
CIMG_00825
Coccidioides immitis
CIMG_00825
N
0.000
EPUS_04289
Endocarpon pusillum
EPUS_04289
N
0.000
HCBG_04552
Histoplasma capsulatum
HCBG_04552
N
0.000
MCYG_04483
Microsporum canis
MCYG_04483
N
0.000
MGYG_02151
Microsporum gypseum
MGYG_02151
N
0.000
NFIA_084300
Neosartorya fischeri
CADNFIAG00008100
N
0.000
PABG_04700
Paracoccidioides brasiliensis
PABG_04700
N
0.000
PAAG_09077
Paracoccidioides sp lutzii
PAAG_09077
N
0.000
Pc13g03900
Penicillium chrysogenum
Pc13g03900
N
0.000
PDIP_84470
Penicillium digitatum
PDIP_84470
N
0.000
PEX1_099230
Penicillium expansum
PEX1_099230
N
0.000
PITC_035170
Penicillium italicum
PITC_035170
N
0.000
PMAA_071030
Penicillium marneffei
PMAA_071030
N
0.000
PDE_04420
Penicillium oxalicum
PDE_04420
N
0.000
PCH_Pc13g03900
Penicillium rubens
PCH_Pc13g03900
N
0.000
U727_00431070561
Penicillium solitum
U727_00431070561
N
0.000
PMAA_071030
Talaromyces marneffei
PMAA_071030
N
0.000
TSTA_091450
Talaromyces stipitatus
TSTA_091450
N
0.000
TEQG_01966
Trichophyton equinum
TEQG_01966
N
0.000
H101_00104
Trichophyton interdigitale
H101_00104
N
0.000
H102_05676
Trichophyton rubrum
H102_05676
N
0.000
H105_05716
Trichophyton soudanense
H105_05716
N
0.000
TESG_01107
Trichophyton tonsurans
TESG_01107
N
0.000
TRV_07120
Trichophyton verrucosum
TRV_07120
N
0.000
UREG_00787
Uncinocarpus reesii
UREG_00787
N
0.000