ASTEI07770 (Anopheles stephensi)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 ASTEI07770 T319769_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.838 0.838
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.708 0.708
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.708 0.708
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.708 0.708
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.708 0.708
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.708 0.708
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.708 0.708
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.708 0.708
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.708 0.708
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.708 0.708
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.708 0.708
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.708 0.708
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASTEI07770-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles stephensi TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
Cla019597 Citrullus lanatus Cla019597 N 0.000
Cucsa.157080 Cucumis sativus Cucsa.157080 N 0.000
Eucgr.G01049 Eucalyptus grandis Eucgr.G01049 N 0.000
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N 0.000
Eucgr.H00826 Eucalyptus grandis Eucgr.H00826 N 0.000
Eucgr.G01047 Eucalyptus grandis Eucgr.G01047 N 0.000
gene01364-v1.0-hybrid Fragaria vesca gene01364-v1.0-hybrid N 0.000
MLOC_55957 Hordeum vulgare MLOC_55957 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
LPERR08G18520 Leersia perrieri LPERR08G18520 N 0.000
Lus10032004.g Linum usitatissimum Lus10032004.g N 0.000
mgf006124m Mimulus guttatus mgf006124m N 0.000
OBART08G21800 Oryza barthii OBART08G21800 N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
OB09G22520 Oryza brachyantha OB09G22520 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N 0.000
BGIOSGA029063 Oryza indica BGIOSGA029063 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
OMERI06G13840 Oryza meridionalis OMERI06G13840 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
ONIVA08G24840 Oryza nivara ONIVA08G24840 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
OPUNC08G19870 Oryza punctata OPUNC08G19870 N 0.000
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
OS08G0535800 Oryza sativa OS08G0535800 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Pavir.Fb00689 Panicum virgatum Pavir.Fb00689 N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Sb02g029460 Sorghum bicolor Sb02g029460 N 0.000
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N 0.000
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N 0.000
TRIUR3_25303 Triticum urartu TRIUR3_25303 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
GRMZM2G100583 Zea mays GRMZM2G100583 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G054252 Zea mays GRMZM2G054252 N 0.000