CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0001168501
(
Ascaris lumbricoides
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
ALUE_0001168501
T319788_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0001168501-mRNA-1
Runt
13
143
EEALSTITASTKLLPTGCPNVICTALPTHWRSNKSLPSPFTVFALGPVPDGTPVTIAAGNEENSCADLRNNKAHMNGQIARFSDLRFVGKSGRGKNFHLTITIETKPAQIAIVGKAIKVTVDGPRDSRNSK
Links
Other
Runt
family TFs
Other
Ascaris lumbricoides
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g07515
Acanthocheilonema viteae
nAv.1.0.1.g07515
N
0.884
ASIM_0001773601
Anisakis simplex
ASIM_0001773601
N
0.940
ASU_08184
Ascaris suum
ASU_08184
N
1.000
Bm1799
Brugia malayi
Bm1799
N
0.884
nDi.2.2.2.g08045
Dirofilaria immitis
nDi.2.2.2.g08045
N
0.868
DME_0000219701
Dracunculus medinensis
DME_0000219701
N
0.845
EEL_0000966201
Elaeophora elaphi
EEL_0000966201
N
0.868
EVEC_0000857101
Enterobius vermicularis
EVEC_0000857101
N
0.845
nLs.2.1.2.g04984
Litomosoides sigmodontis
nLs.2.1.2.g04984
N
0.862
nOo.2.0.1.g09037
Onchocerca ochengi
nOo.2.0.1.g09037
N
0.860
WBGene00238576
Onchocerca volvulus
WBGene00238576
N
0.860
SMUV_0000585701
Syphacia muris
SMUV_0000585701
N
0.837
TCLT_0000903901
Thelazia callipaeda
TCLT_0000903901
N
0.853
TCNE_0001283301
Toxocara canis
TCNE_0001283301
N
0.853
WUBG_02358
Wuchereria bancrofti
WUBG_02358
N
0.891