CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0003260001
(
Protopolystoma xenopodis
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
PXEA_0003260001
T319839_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0003260001-mRNA-1
Runt
11
132
LRRALREHTGDLVVTSSPHLLCSSLPKHWRSNKSLPTPFRVVSLKPIPNGTKVALLAGNEERPCAELKNAVAVMHNQEARFSDLRFLGRSGRGSLESKEIATETVSAETVLCLSQSAALQVE
Links
Other
Runt
family TFs
Other
Protopolystoma xenopodis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADAFLAG00000438
Aspergillus flavus
CADAFLAG00000438
N
0.000
ANIA_06715
Aspergillus nidulans
CADANIAG00007503
N
0.000
CADANGAG00005499
Aspergillus niger
CADANGAG00005499
N
0.000
CADAORAG00002423
Aspergillus oryzae
CADAORAG00002423
N
0.000
EURHEDRAFT_448117
Aspergillus ruber
EURHEDRAFT_448117
N
0.000
ATEG_06370
Aspergillus terreus
CADATEAG00008183
N
0.000
BDDG_00964
Blastomyces dermatitidis
BDDG_00964
N
0.000
PVAR5_5971
Byssochlamys spectabilis
PVAR5_5971
N
0.000
HCBG_01177
Histoplasma capsulatum
HCBG_01177
N
0.000
NFIA_026870
Neosartorya fischeri
CADNFIAG00002605
N
0.000
HPODL_04058
Ogataea parapolymorpha
HPODL_04058
N
0.000
PABG_05070
Paracoccidioides brasiliensis
PABG_05070
N
0.000
PAAG_00034
Paracoccidioides sp lutzii
PAAG_00034
N
0.000
Pc12g06750
Penicillium chrysogenum
Pc12g06750
N
0.000
PDIP_54290
Penicillium digitatum
PDIP_54290
N
0.000
PITC_033140
Penicillium italicum
PITC_033140
N
0.000
PDE_09266
Penicillium oxalicum
PDE_09266
N
0.000
PCH_Pc12g06750
Penicillium rubens
PCH_Pc12g06750
N
0.000
U727_0043243011
Penicillium solitum
U727_0043243011
N
0.000
XP_002489438.1
Pichia pastoris
XP_002489438.1
N
0.000
SPOG_04098
Schizosaccharomyces cryophilus
SPOG_04098
N
0.000
SJAG_00987
Schizosaccharomyces japonicus
SJAG_00987
N
0.000
SOCG_03639
Schizosaccharomyces octosporus
SOCG_03639
N
0.000
UREG_06253
Uncinocarpus reesii
UREG_06253
N
0.000