Bo1g037430 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo1g037430 T319920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		1.000 1.000
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g037430.1 RWP-RK 632 680

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_194259 Amanita muscaria M378DRAFT_194259 N 0.000
BOTBODRAFT_173998 Botryobasidium botryosum BOTBODRAFT_173998 N 0.000
CC1G_12253 Coprinopsis cinerea CC1G_12253 N 0.000
DICSQDRAFT_15457 Dichomitus squalens DICSQDRAFT_15457 N 0.000
FOMPIDRAFT_31533 Fomitopsis pinicola FOMPIDRAFT_31533 N 0.000
GALMADRAFT_262763 Galerina marginata GALMADRAFT_262763 N 0.000
M413DRAFT_447606 Hebeloma cylindrosporum M413DRAFT_447606 N 0.000
gw1.4.1016.1 Heterobasidion annosum gw1.4.1016.1 N 0.000
HETIRDRAFT_18789 Heterobasidion irregulare HETIRDRAFT_18789 N 0.000
JAAARDRAFT_27573 Jaapia argillacea JAAARDRAFT_27573 N 0.000
K443DRAFT_677044 Laccaria amethystina K443DRAFT_677044 N 0.000
LACBIDRAFT_296037 Laccaria bicolor LACBIDRAFT_296037 N 0.000
MPER_08759 Moniliophthora perniciosa MPER_08759 N 0.000
Moror_5777 Moniliophthora roreri Moror_5777 N 0.000
PAXINDRAFT_138172 Paxillus involutus PAXINDRAFT_138172 N 0.000
PAXRUDRAFT_826503 Paxillus rubicundulus PAXRUDRAFT_826503 N 0.000
PHACADRAFT_251015 Phanerochaete carnosa PHACADRAFT_251015 N 0.000
fgenesh1_pg.C_scaffold_27000033 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_27000033 N 0.000
PILCRDRAFT_596287 Piloderma croceum PILCRDRAFT_596287 N 0.000
PISMIDRAFT_36525 Pisolithus microcarpus PISMIDRAFT_36525 N 0.000
M404DRAFT_1000446 Pisolithus tinctorius M404DRAFT_1000446 N 0.000
PLEOSDRAFT_9817 Pleurotus ostreatus PLEOSDRAFT_9817 N 0.000
POSPLDRAFT_93658 Postia placenta POSPLDRAFT_93658 N 0.000
SCLCIDRAFT_94331 Scleroderma citrinum SCLCIDRAFT_94331 N 0.000
CY34DRAFT_41394 Suillus luteus CY34DRAFT_41394 N 0.000