Bo4g019840 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo4g019840 T319925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.816 0.816
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g019840.1 RWP-RK 531 579

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG019896.1 Alligator sinensis Alligator_sinensis_CCG019896.1 N 0.000
Gfo_R004190 Geospiza fortis Gfo_R004190 N 0.000
PRDM15 Otolemur garnettii ENSOGAG00000006444 N 0.000
ENSOARG00000010468 Ovis aries ENSOARG00000010468 N 0.000
ENSPSIG00000006944 Pelodiscus sinensis ENSPSIG00000006944 N 0.000
Pvit_14291 Pogona vitticeps Pvit_14291 N 0.000