Bo6g120380 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo6g120380 T319929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.959 0.959
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g120380.1 RWP-RK 543 591

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_004430 Acremonium chrysogenum ACRE_004430 I 0.000
Bcin06g06480 Botrytis cinerea Bcin06g06480 I 0.000
A1O1_04664 Capronia coronata A1O1_04664 I 0.000
PV04_08189 Capronia semiimmersa PV04_08189 I 0.000
Z519_05358 Cladophialophora bantiana Z519_05358 I 0.000
G647_02381 Cladophialophora carrionii G647_02381 I 0.000
PV07_11936 Cladophialophora immunda PV07_11936 I 0.000
A1O5_09249 Cladophialophora psammophila A1O5_09249 I 0.000
A1O7_07701 Cladophialophora yegresii A1O7_07701 I 0.000
CGGC5_14308 Colletotrichum gloeosporioides CGGC5_14308 I 0.000
GLRG_08361 Colletotrichum graminicola GLRG_08361 I 0.000
CH063_05452 Colletotrichum higginsianum CH063_05452 I 0.000
CSUB01_02000 Colletotrichum sublineola CSUB01_02000 I 0.000
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I 0.000
EPUS_00089 Endocarpon pusillum EPUS_00089 I 0.000
A1O9_01966 Exophiala aquamarina A1O9_01966 I 0.000
HMPREF1120_01670 Exophiala dermatitidis HMPREF1120_01670 I 0.000
PV06_02589 Exophiala oligosperma PV06_02589 I 0.000
PV11_06331 Exophiala sideris PV11_06331 I 0.000
PV08_11364 Exophiala spinifera PV08_11364 I 0.000
PV05_09089 Exophiala xenobiotica PV05_09089 I 0.000
Z517_03357 Fonsecaea pedrosoi Z517_03357 I 0.000
FFUJ_09085 Fusarium fujikuroi FFUJ_09085 I 0.000
FGRRES_17238 Fusarium graminearum FGRRES_17238 D 0.000
FGRRES_17152 Fusarium graminearum FGRRES_17152 D 0.000
FOXG_08967 Fusarium oxysporum FOXG_08967 I 0.000
FOXG_05651 Fusarium oxysporum FOXG_05651 I 0.000
FVEG_06579 Fusarium verticillioides FVEG_06579 I 0.000
FVEG_04119 Fusarium verticillioides FVEG_04119 I 0.000
GGTG_02769 Gaeumannomyces graminis GGTG_02769 I 0.000
CMQ_3175 Grosmannia clavigera CMQ_3175 I 0.000
MAPG_01731 Magnaporthe poae MAPG_01731 I 0.000
MYCTH_122893 Myceliophthora thermophila MYCTH_122893 I 0.000
OIDMADRAFT_141009 Oidiodendron maius OIDMADRAFT_141009 I 0.000
F503_02949 Ophiostoma piceae uamh F503_02949 I 0.000
PDIP_88440 Penicillium digitatum PDIP_88440 I 0.000
Z518_06732 Rhinocladiella mackenziei Z518_06732 I 0.000
SAPIO_CDS1962 Scedosporium apiospermum SAPIO_CDS1962 I 0.000
SS1G_03098 Sclerotinia sclerotiorum SS1G_03098 I 0.000
SPBR_00057 Sporothrix brasiliensis SPBR_00057 I 0.000
HMPREF1624_05953 Sporothrix schenckii HMPREF1624_05953 I 0.000
VHEMI03354 Torrubiella hemipterigena VHEMI03354 I 0.000
TRIREDRAFT_119826 Trichoderma reesei TRIREDRAFT_119826 I 0.000
UV8b_5932 Ustilaginoidea virens UV8b_5932 I 0.000
VDBG_00856 Verticillium albo atrum VDBG_00856 I 0.000
VDBG_00856 Verticillium alfalfae VDBG_00856 I 0.000
VDAG_00465 Verticillium dahliae VDAG_00465 I 0.000
VDAG_07897 Verticillium dahliae VDAG_07897 I 0.000