Bra003382 (Brassica rapa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bra003382 T319947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003382.1-P RWP-RK 545 593

Links

Other RWP-RK family TFs
Other Brassica rapa TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00083g463 Arthrobotrys oligospora AOL_s00083g463 I 0.000
ARB_05394 Arthroderma benhamiae ARB_05394 N 0.000
MCYG_00678 Arthroderma otae MCYG_00678 N 0.000
e_gw1.00866.172.1 Aspergillus carbonarius e_gw1.00866.172.1 I 0.000
ACLA_039140 Aspergillus clavatus CADACLAG00003633 N 0.000
CADAFLAG00002515 Aspergillus flavus CADAFLAG00002515 I 0.000
AFUA_3G11250 Aspergillus fumigatus CADAFUAG00005698 I 0.000
ANIA_04873 Aspergillus nidulans CADANIAG00005532 I 0.000
CADANGAG00002216 Aspergillus niger CADANGAG00002216 I 0.000
CADAORAG00001279 Aspergillus oryzae CADAORAG00001279 I 0.000
EURHEDRAFT_515807 Aspergillus ruber EURHEDRAFT_515807 I 0.000
ATEG_04658 Aspergillus terreus CADATEAG00009335 I 0.000
Bcin02g07540 Botrytis cinerea Bcin02g07540 I 0.000
PVAR5_7714 Byssochlamys spectabilis PVAR5_7714 I 0.000
A1O1_03114 Capronia coronata A1O1_03114 I 0.000
A1O3_01974 Capronia epimyces A1O3_01974 I 0.000
PV04_04915 Capronia semiimmersa PV04_04915 I 0.000
CTHT_0018750 Chaetomium thermophilum CTHT_0018750 I 0.000
Z519_10261 Cladophialophora bantiana Z519_10261 I 0.000
PV07_07651 Cladophialophora immunda PV07_07651 I 0.000
A1O5_03439 Cladophialophora psammophila A1O5_03439 I 0.000
A1O7_04367 Cladophialophora yegresii A1O7_04367 I 0.000
CPUR_04347 Claviceps purpurea CPUR_04347 I 0.000
CIMG_03820 Coccidioides immitis CIMG_03820 N 0.000
CPC735_005020 Coccidioides posadasii CPC735_005020 N 0.000
HMPREF1541_09309 Cyphellophora europaea HMPREF1541_09309 I 0.000
H072_10673 Dactylellina haptotyla H072_10673 I 0.000
EPUS_07921 Endocarpon pusillum EPUS_07921 I 0.000
EV44_g6127 Erysiphe necator EV44_g6127 I 0.000
A1O9_00612 Exophiala aquamarina A1O9_00612 I 0.000
HMPREF1120_06603 Exophiala dermatitidis HMPREF1120_06603 I 0.000
PV10_00143 Exophiala mesophila PV10_00143 I 0.000
PV06_04279 Exophiala oligosperma PV06_04279 I 0.000
PV11_04194 Exophiala sideris PV11_04194 I 0.000
PV08_10349 Exophiala spinifera PV08_10349 I 0.000
PV05_09372 Exophiala xenobiotica PV05_09372 I 0.000
Z517_12080 Fonsecaea pedrosoi Z517_12080 I 0.000
MBM_04034 Marssonina brunnea MBM_04034 I 0.000
MCYG_00678 Microsporum canis MCYG_00678 N 0.000
MGYG_01294 Microsporum gypseum MGYG_01294 N 0.000
MYCTH_2308260 Myceliophthora thermophila MYCTH_2308260 I 0.000
NFIA_066040 Neosartorya fischeri CADNFIAG00006379 I 0.000
NCU06907 Neurospora crassa NCU06907 D 0.000
estExt_fgenesh2_pg.C_80281 Neurospora discreta estExt_fgenesh2_pg.C_80281 I 0.000
NEUTE1DRAFT_130988 Neurospora tetrasperma NEUTE1DRAFT_130988 I 0.000
OIDMADRAFT_103771 Oidiodendron maius OIDMADRAFT_103771 I 0.000
F503_03781 Ophiostoma piceae uamh F503_03781 I 0.000
PABG_02567 Paracoccidioides brasiliensis PABG_02567 N 0.000
Pc13g09500 Penicillium chrysogenum Pc13g09500 N 0.000
PDIP_29800 Penicillium digitatum PDIP_29800 N 0.000
PEX1_090700 Penicillium expansum PEX1_090700 N 0.000
PITC_062120 Penicillium italicum PITC_062120 N 0.000
PMAA_023500 Penicillium marneffei PMAA_023500 N 0.000
PDE_04896 Penicillium oxalicum PDE_04896 N 0.000
PCH_Pc13g09500 Penicillium rubens PCH_Pc13g09500 N 0.000
U727_00433320351 Penicillium solitum U727_00433320351 N 0.000
PODANS_5_11890 Podospora anserina PODANS_5_11890 I 0.000
GMDG_06980 Pseudogymnoascus destructans GMDG_06980 I 0.000
V499_09093 Pseudogymnoascus pannorum V499_09093 I 0.000
Z518_09813 Rhinocladiella mackenziei Z518_09813 I 0.000
SBOR_8019 Sclerotinia borealis SBOR_8019 I 0.000
SMAC_05878 Sordaria macrospora SMAC_05878 I 0.000
PMAA_023500 Talaromyces marneffei PMAA_023500 N 0.000
TSTA_031880 Talaromyces stipitatus TSTA_031880 N 0.000
THITE_2117700 Thielavia terrestris THITE_2117700 I 0.000
TEQG_05544 Trichophyton equinum TEQG_05544 N 0.000
H101_04757 Trichophyton interdigitale H101_04757 N 0.000
H102_07608 Trichophyton rubrum H102_07608 N 0.000
H105_07634 Trichophyton soudanense H105_07634 N 0.000
TESG_05703 Trichophyton tonsurans TESG_05703 N 0.000
TRV_03376 Trichophyton verrucosum TRV_03376 N 0.000
GSTUM_00007462001 Tuber melanosporum GSTUM_00007462001 I 0.000