MLOC_51688 (Hordeum vulgare)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MLOC_51688 T320532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.905 0.905
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.810 0.810
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_51688.1 RWP-RK 1 21
MLOC_51688.2 RWP-RK 1 21

Links

Other RWP-RK family TFs
Other Hordeum vulgare TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.2__24__AT1G64530.1 Arabidopsis lyrata fgenesh2_kg.2__24__AT1G64530.1 I 0.905
NLP6 Arabidopsis thaliana AT1G64530 I 0.905
BRADI1G76340 Brachypodium distachyon BRADI1G76340 I 0.810
BRADI2G31710 Brachypodium distachyon BRADI2G31710 I 0.762
BRADI4G20730 Brachypodium distachyon BRADI4G20730 I 0.857
Bo4g194380 Brassica oleracea Bo4g194380 I 0.810
Bo9g032270 Brassica oleracea Bo9g032270 I 0.905
Bra040914 Brassica rapa Bra040914 I 0.905
Carubv10004068m.g Capsella rubella Carubv10004068m.g I 0.810
Thhalv10023271m.g Eutrema salsugineum Thhalv10023271m.g I 0.905
chr1.CM0178.280.nc Lotus japonicus chr1.CM0178.280.nc I 0.762
MDP0000788505 Malus domestica MDP0000788505 I 0.810
mgf013203m Mimulus guttatus mgf013203m I 0.905
OBART04G17320 Oryza barthii OBART04G17320 I 0.810
ORGLA04G0144400 Oryza glaberrima ORGLA04G0144400 I 0.810
BGIOSGA016686 Oryza indica BGIOSGA016686 I 0.810
OLONG_009319 Oryza longistaminata OLONG_009319 I 0.810
OMERI04G14630 Oryza meridionalis OMERI04G14630 I 0.810
ONIVA04G15630 Oryza nivara ONIVA04G15630 I 0.810
ORUFI04G18750 Oryza rufipogon ORUFI04G18750 I 0.810
OS04G0495800 Oryza sativa OS04G0495800 I 0.810
Pavir.Ga01502 Panicum virgatum Pavir.Ga01502 I 0.857
Pm022964 Prunus mume Pm022964 I 0.810
PRUPE_ppa001086mg Prunus persica PRUPE_ppa001086mg I 0.810
SapurV1A.0374s0230 Salix purpurea SapurV1A.0374s0230 I 0.810
SapurV1A.3634s0010 Salix purpurea SapurV1A.3634s0010 I 0.810
Solyc08g008410.2 Solanum lycopersicum Solyc08g008410.2 I 0.905
PGSC0003DMG402012256 Solanum tuberosum PGSC0003DMG402012256 I 0.905
PGSC0003DMG401005796 Solanum tuberosum PGSC0003DMG401005796 I 0.905
Sb06g021370 Sorghum bicolor Sb06g021370 I 0.857
GRMZM2G105004 Zea mays GRMZM2G105004 I 0.857
GRMZM2G031398 Zea mays GRMZM2G031398 I 0.857