OMERI02G30990 (Oryza meridionalis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OMERI02G30990 T320598_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.735 0.735
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI02G30990.1 RWP-RK 114 162

Links

Other RWP-RK family TFs
Other Oryza meridionalis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.000
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.000
LPERR06G19690 Leersia perrieri LPERR06G19690 I 0.000
OB06G31430 Oryza brachyantha OB06G31430 I 0.000
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I 0.000
OGLUM06G24950 Oryza glumaepatula OGLUM06G24950 I 0.000
BGIOSGA020743 Oryza indica BGIOSGA020743 I 0.000
BGIOSGA020738 Oryza indica BGIOSGA020738 I 0.000
OMERI06G23650 Oryza meridionalis OMERI06G23650 I 0.000
ONIVA06G27820 Oryza nivara ONIVA06G27820 I 0.000
OPUNC06G21410 Oryza punctata OPUNC06G21410 I 0.000
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I 0.000
OS06G0662200 Oryza sativa OS06G0662200 I 0.000
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I 0.000
Pm005087 Prunus mume Pm005087 I 0.000
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I 0.000
Si007043m.g Setaria italica Si007043m.g I 0.000
Sb10g026450 Sorghum bicolor Sb10g026450 I 0.000
GRMZM2G103647 Zea mays GRMZM2G103647 I 0.000