OMERI11G08010 (Oryza meridionalis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OMERI11G08010 T320605_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.703 0.703
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI11G08010.10 RWP-RK 224 260
OMERI11G08010.11 RWP-RK 641 689
OMERI11G08010.1 RWP-RK 563 599
OMERI11G08010.2 RWP-RK 596 644
OMERI11G08010.3 RWP-RK 703 751
OMERI11G08010.5 RWP-RK 641 689
OMERI11G08010.6 RWP-RK 531 579
OMERI11G08010.7 RWP-RK 581 629
OMERI11G08010.8 RWP-RK 534 582
OMERI11G08010.9 RWP-RK 638 686

Links

Other RWP-RK family TFs
Other Oryza meridionalis TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_061690 Aspergillus clavatus CADACLAG00005732 N 0.000
EURHEDRAFT_517568 Aspergillus ruber EURHEDRAFT_517568 N 0.000
NFIA_004110 Neosartorya fischeri CADNFIAG00000518 N 0.000