VIT_03s0038g03710 (Vitis vinifera)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 VIT_03s0038g03710 T320892_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.898 0.898
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0038g03710.t01 RWP-RK 631 679

Links

Other RWP-RK family TFs
Other Vitis vinifera TFs

410 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g06570 Acanthocheilonema viteae nAv.1.0.1.g06570 I
ANCCAN_03591 Ancylostoma caninum ANCCAN_03591 N
ANCCEY_10263 Ancylostoma ceylanicum ANCCEY_10263 N
ACOC_0000564301 Angiostrongylus costaricensis ACOC_0000564301 N
ASIM_0001335601 Anisakis simplex ASIM_0001335601 I
ALUE_0000326401 Ascaris lumbricoides ALUE_0000326401 I
ASU_05094 Ascaris suum ASU_05094 I
BGLB003270 Biomphalaria glabrata BGLB003270 I
Bm7588 Brugia malayi Bm7588 I
BTMF_0000617301 Brugia timori BTMF_0000617301 I
CBN32559 Caenorhabditis brenneri CBN32559 I
CBG19808 Caenorhabditis briggsae CBG19808 I
ces-2 Caenorhabditis elegans WBGene00000469 D
CJA10655 Caenorhabditis japonica CJA10655 I
CRE13954 Caenorhabditis remanei CRE13954 I
CLEC000050 Cimex lectularius CLEC000050 N
CLEC001633 Cimex lectularius CLEC001633 N
CGI_10015382 Crassostrea gigas CGI_10015382 N
CGI_10024700 Crassostrea gigas CGI_10024700 N
DICVIV_06567 Dictyocaulus viviparus DICVIV_06567 I
nDi.2.2.2.g01315 Dirofilaria immitis nDi.2.2.2.g01315 I
nDi.2.2.2.g10294 Dirofilaria immitis nDi.2.2.2.g10294 I
DME_0000215901 Dracunculus medinensis DME_0000215901 I
EEL_0000071901 Elaeophora elaphi EEL_0000071901 I
GPUH_0000579801 Gongylonema pulchrum GPUH_0000579801 I
HPLM_0000323401 Haemonchus placei HPLM_0000323401 I
HelroG146802 Helobdella robusta HelroG146802 N
LDEC005996 Leptinotarsa decemlineata LDEC005996 N
nLs.2.1.2.g06633 Litomosoides sigmodontis nLs.2.1.2.g06633 I
LOAG_04491 Loa loa LOAG_04491 I
LotgiG89985 Lottia gigantea LotgiG89985 N
NECAME_03378 Necator americanus NECAME_03378 N
OFLC_0001455401 Onchocerca flexuosa OFLC_0001455401 I
nOo.2.0.1.g09202 Onchocerca ochengi nOo.2.0.1.g09202 I
WBGene00237430 Onchocerca volvulus WBGene00237430 I
PEQ_0001019701 Parascaris equorum PEQ_0001019701 I
PTRK_0001316500 Parastrongyloides trichosuri PTRK_0001316500 I
RPRC001027 Rhodnius prolixus RPRC001027 N
Sakowv30032301m.g Saccoglossus kowalevskii Sakowv30032301m.g N
L596_g21771 Steinernema carpocapsae L596_g21771 N
L596_g3194 Steinernema carpocapsae L596_g3194 I
L893_g26459 Steinernema glaseri L893_g26459 I
L898_g30246 Steinernema monticolum L898_g30246 I
L892_g28108 Steinernema scapterisci L892_g28108 N
SPU_014528 Strongylocentrotus purpuratus SPU_014528 N
SPU_021150 Strongylocentrotus purpuratus SPU_021150 I
SPAL_0001536200 Strongyloides papillosus SPAL_0001536200 I
SSTP_0000025200 Strongyloides stercoralis SSTP_0000025200 I
SMUV_0001027601 Syphacia muris SMUV_0001027601 I
EFV48635 Trichinella spiralis EFV48635 N
WUBG_01294 Wuchereria bancrofti WUBG_01294 I