Cla023812 (Citrullus lanatus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Cla023812 T320921_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.939 0.939
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla023812 RWP-RK 593 641

Links

Other RWP-RK family TFs
Other Citrullus lanatus TFs

412 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AUEXF2481DRAFT_674882 Aureobasidium subglaciale AUEXF2481DRAFT_674882 N 0.000
BAUCODRAFT_37166 Baudoinia compniacensis BAUCODRAFT_37166 I 0.000
CHGG_04697 Chaetomium globosum CHGG_04697 I 0.000
DOTSEDRAFT_161080 Dothistroma septosporum DOTSEDRAFT_161080 I 0.000
GGTG_02836 Gaeumannomyces graminis GGTG_02836 I 0.000
CMQ_4894 Grosmannia clavigera CMQ_4894 N 0.000
MPH_12582 Macrophomina phaseolina MPH_12582 I 0.000
MGG_12339 Magnaporthe oryzae MGG_12339 I 0.000
MYCTH_2298970 Myceliophthora thermophila MYCTH_2298970 I 0.000
e_gw1.7.93.1 Mycosphaerella fijiensis e_gw1.7.93.1 I 0.000
e_gw1.5.1618.1 Mycosphaerella graminicola e_gw1.5.1618.1 I 0.000
UCRNP2_10087 Neofusicoccum parvum UCRNP2_10087 I 0.000
NCU07675 Neurospora crassa NCU07675 D 0.000
estExt_Genewise1Plus.C_31316 Neurospora discreta estExt_Genewise1Plus.C_31316 I 0.000
NEUTE1DRAFT_60106 Neurospora tetrasperma NEUTE1DRAFT_60106 I 0.000
PFICI_04665 Pestalotiopsis fici PFICI_04665 I 0.000
MYCFIDRAFT_34745 Pseudocercospora fijiensis MYCFIDRAFT_34745 I 0.000
SMAC_00876 Sordaria macrospora SMAC_00876 I 0.000
SEPMUDRAFT_148959 Sphaerulina musiva SEPMUDRAFT_148959 I 0.000
SPBR_00126 Sporothrix brasiliensis SPBR_00126 N 0.000
HMPREF1624_05867 Sporothrix schenckii HMPREF1624_05867 N 0.000
TRIVIDRAFT_221632 Trichoderma virens TRIVIDRAFT_221632 I 0.000
PV09_03219 Verruconis gallopava PV09_03219 I 0.000
Mycgr3G41440 Zymoseptoria tritici Mycgr3G41440 I 0.000